RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 ADARP55265 1226 aaKnown RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 IRGCQ6NXR0 463 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SATL1Q86VE3 508 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 PROM2Q8N271 834 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 RASGEF1CQ8N431 466 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 POU5F2Q8N7G0 328 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC26A7Q8TE54 656 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SH3TC2Q8TF17 1288 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 RSPH1Q8WYR4 309 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SYN2Q92777 582 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZSWIM1Q9BR11 485 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 BRIP1Q9BX63 1249 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ANAPC7Q9UJX3 599 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF148Q9UQR1 794 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 NUMBLQ9Y6R0 609 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 DCTN3O75935 186 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 PSMG1O95456 288 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC166P0CW27 439 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 KRT10P13645 584 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 RCAN1P53805 252 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 MYL7Q01449 175 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZCWPW2Q504Y3 356 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 PPP1R21Q6ZMI0 780 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 C4orf50Q6ZRC1 276 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 INTS2Q9H0H0 1204 aaKnown RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 GRID1Q9ULK0 1009 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 USP20Q9Y2K6 914 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 BCL9LQ86UU0 1499 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 E2F8A0AVK6 867 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PDE5AO76074 875 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 LYNP07948 512 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 BMP3P12645 472 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 ENDOUP21128 410 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 HIBADHP31937 336 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 CCR3P51677 355 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PPATQ06203 517 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 EPHA7Q15375 998 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 ALYREFQ86V81 257 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC35C1Q96A29 364 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 MAELQ96JY0 434 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 LRMDAQ9H2I8 198 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 AAASQ9NRG9 546 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 ATAD3AQ9NVI7 634 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 DNM3Q9UQ16 869 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 RBMX2Q9Y388 322 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 SPECC1L-ADORA2AF8WAN1 911 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 KDM1AO60341 852 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 IL2RBP14784 551 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 ARFIP2P53365 341 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC34A1Q06495 639 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 RALGDSQ12967 914 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PPP6R3Q5H9R7 873 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 IYDQ6PHW0 289 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC110Q8TBZ0 833 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 EIF2AQ9BY44 585 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 TMED5Q9Y3A6 229 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 C5P01031 1676 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 CIB2O75838 187 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 GAS8O95995 478 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 OAS1P00973 400 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PTPN4P29074 926 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PLOD1Q02809 727 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PEX6Q13608 980 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 GPR162Q16538 588 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 MAPK6Q16659 721 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PHLDB3Q6NSJ2 640 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 CYP2W1Q8TAV3 490 aa10.65□□□□□ -0.7
PDGFRB-207ENST00000520579 PCDH11YQ9BZA8 1340 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 STAMBPO95630 424 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 GSTT2P0CG29 244 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 GSTT2BP0CG30 244 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ACADSP16219 412 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DLG4P78352 724 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 SEPT6Q14141 434 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 EML3Q32P44 896 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ERFEQ4G0M1 354 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PAOXQ6QHF9 649 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 CTAGE3PQ8IX95 158 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 MYO1HQ8N1T3 1032 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 SEC14L1Q92503 715 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 AGPAT1Q99943 283 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 HERPUD2Q9BSE4 406 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 SPZ1Q9BXG8 430 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DNAI2Q9GZS0 605 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 EBF3Q9H4W6 596 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PSTPIP2Q9H939 334 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 NDE1Q9NXR1 346 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 SLC17A7Q9P2U7 560 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms