RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SLC9A2Q9UBY0 812 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 AKT3Q9Y243 479 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 VWA8A3KMH1 1905 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SALL3Q9BXA9 1300 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 COL1A2P08123 1366 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 CACNA1DQ01668 2161 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 SPG11Q96JI7 2443 aa7.67□□□□□ -1.18
CTNNA1-216ENST00000519489 THADAQ6YHU6 1953 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 MEIS2O14770 477 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ZBTB5O15062 677 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 RRP8O43159 456 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 SUV39H1O43463 412 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ADH1CP00326 375 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 PTPN2P17706 415 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ZNF76P36508 570 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 P2RY2P41231 377 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ATXN3P54252 364 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 SLC14A1Q13336 389 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 RAB33AQ14088 237 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 USP39Q53GS9 565 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 STXBP5Q5T5C0 1151 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 KIAA1614Q5VZ46 1190 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 EFCAB12Q6NXP0 572 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 C1orf228Q6PIY5 440 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 TRMT1LQ7Z2T5 733 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ERC1Q8IUD2 1116 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 CLASRPQ8N2M8 674 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 PNMA1Q8ND90 353 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 MDGA1Q8NFP4 955 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 URGCPQ8TCY9 931 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 ZFP42Q96MM3 310 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 TTC14Q96N46 770 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 FAM193BQ96PV7 902 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 PIGSQ96S52 555 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 NACAP1Q9BZK3 213 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 PIN4Q9Y237 131 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 BTBD3Q9Y2F9 522 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 TNRC6BQ9UPQ9 1833 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 KNTC1P50748 2209 aa7.66□□□□□ -1.18
CTNNA1-216ENST00000519489 TRDMT1O14717 391 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 CYTH3O43739 400 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 ATG13O75143 517 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 MICAL2O94851 1124 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 SEC24AO95486 1093 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 TIMP2P16035 220 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 OR1D2P34982 312 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 PI4KAP42356 2102 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 HELZP42694 1942 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 SCNN1GP51170 649 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 TEAD2Q15562 447 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 PSMD5Q16401 504 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 QPCTQ16769 361 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 DUOXA1Q1HG43 343 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 ASPRV1Q53RT3 343 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 C2orf27AQ580R0 203 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 ANO7Q6IWH7 933 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 DHRS13Q6UX07 377 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 NFXL1Q6ZNB6 911 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 LPCAT2Q7L5N7 544 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 TRMT2AQ8IZ69 625 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 SHKBP1Q8TBC3 707 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 HASPINQ8TF76 798 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 FOXJ1Q92949 421 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 POM121Q96HA1 1249 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 GAD1Q99259 594 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 HPS4Q9NQG7 708 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 TOMM22Q9NS69 142 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 ADAM28Q9UKQ2 775 aa7.65□□□□□ -1.18
CTNNA1-216ENST00000519489 EVPLQ92817 2033 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 ARHGEF37A1IGU5 675 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 ARL5CA6NH57 179 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 E9PAM4 449 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 SKIP12755 728 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 ITGB6P18564 788 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 ELAVL4P26378 380 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 GRNP28799 593 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 HOXA11P31270 313 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 MLH1P40692 756 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 GALK1P51570 392 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 MTMR1Q13613 665 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 LYSMD4Q5XG99 296 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 HOMER1Q86YM7 354 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 TBC1D10CQ8IV04 446 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 GALNT15Q8N3T1 639 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 TSTD1Q8NFU3 115 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 FGF11Q92914 225 aa7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 NAF1Q96HR8 494 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 CNOT6LQ96LI5 555 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-216ENST00000519489 PI4K2AQ9BTU6 479 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms