RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 CISHQ9NSE2 258 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 NXF1Q9UBU9 619 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 PADI3Q9ULW8 664 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 JRKLQ9Y4A0 524 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 HES2Q9Y543 173 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 DUSP10Q9Y6W6 482 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 NCANO14594 1321 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZNF623O75123 536 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 MMEP08473 750 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 CCL5P13501 91 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 ITGA4P13612 1032 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 AKAP5P24588 427 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 PNPLA4P41247 253 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 LPIN1Q14693 890 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 TAF3Q5VWG9 929 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 RHOT2Q8IXI1 618 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 MYRIPQ8NFW9 859 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 RFFLQ8WZ73 363 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRIM11Q96F44 468 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 OGDHLQ9ULD0 1010 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
TRAPPC9-205ENST00000518839 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 MOCS3O95396 460 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 FTLP02792 175 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 PAEPP09466 180 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 GHRP10912 638 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 CKBP12277 381 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 CD52P31358 61 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 CDK7P50613 346 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 GPC5P78333 572 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 BFSP2Q13515 415 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 DSC3Q14574 896 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 TCEAL1Q15170 157 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 CLEC16AQ2KHT3 1053 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 ACAD10Q6JQN1 1059 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 MRPL10Q7Z7H8 261 aaKnown RBP16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 PGBD4Q96DM1 585 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZMAT2Q96NC0 199 aaKnown RBP16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 DEFB118Q96PH6 123 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 DNAI2Q9GZS0 605 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 UBN1Q9NPG3 1134 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
TRAPPC9-205ENST00000518839 TMCO5BA8MYB1 307 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 FANCGO15287 622 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 THAP12O43422 761 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 MED7O43513 233 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 SLU7O95391 586 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 MYBL1P10243 752 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 CD58P19256 250 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 NOP2P46087 812 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 C9orf57Q5W0N0 161 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 PAPD7Q5XG87 772 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 SCARA5Q6ZMJ2 495 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 CDC23Q9UJX2 597 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.16
TRAPPC9-205ENST00000518839 SCN1AP35498 2009 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 PIRO00625 290 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 BUB1O43683 1085 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 WEE2P0C1S8 567 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 LRPAP1P30533 357 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 GUCY2FP51841 1108 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 INCA1Q0VD86 236 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 PALB2Q86YC2 1186 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 ZNF518BQ9C0D4 1074 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 TAS2R14Q9NYV8 317 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 KLK14Q9P0G3 267 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 TUBGCP4Q9UGJ1 667 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 KIAA1257Q9ULG3 409 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
TRAPPC9-205ENST00000518839 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 CILPO75339 1184 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 SELPP16109 830 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 PRLRP16471 622 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 ABCB4P21439 1286 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 GTF2F1P35269 517 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms