RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 AADACL2Q6P093 401 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 BTNL9Q6UXG8 535 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC20A1Q8WUM9 679 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 M0R2N6 131 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 RIPK2O43353 540 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 ITIH2P19823 946 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 GMPSP49915 693 aaPredicted RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 GRIK5Q16478 980 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 PPM1NQ8N819 430 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 BEST2Q8NFU1 509 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 CENPTQ96BT3 561 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 KCTD10Q9H3F6 313 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 DUOX1Q9NRD9 1551 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TYW5A2RUC4 315 aaKnown RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 IQCA1LA6NCM1 817 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 ENO4A6NNW6 628 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 OPHN1O60890 802 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 ITGA8P53708 1063 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MTM1Q13496 603 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC10A5Q5PT55 438 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 STYK1Q6J9G0 422 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MIEF2Q96C03 454 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TSC22D3Q99576 134 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 CASQ2O14958 399 aaPredicted RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 CDH16O75309 829 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 PRKCBP05771 671 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TMPRSS15P98073 1019 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZBED8Q8IZ13 594 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 LNX1Q8TBB1 728 aaPredicted RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 SERPINB12Q96P63 405 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 FAM118BQ9BPY3 351 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 PI4K2AQ9BTU6 479 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MYH2Q9UKX2 1941 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MSH4O15457 936 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 FNTAP49354 379 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 EPHB1P54762 984 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC12A3P55017 1021 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 CDH6P55285 790 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 NME3Q13232 169 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRIM42Q8IWZ5 723 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 MXRA8Q9BRK3 442 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRIM4Q9C037 500 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 A1CFQ9NQ94 594 aaKnown RBP11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 AGPAT3Q9NRZ7 376 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 DCTN4Q9UJW0 460 aa11.42□□□□□ -0.58
PCDHGA1-202ENST00000517417 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 XPAP23025 273 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 CASP2P42575 452 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 PDIA2Q13087 525 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 BZW1Q7L1Q6 419 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 LRRC71Q8N4P6 559 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 HES6Q96HZ4 224 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 TAAR1Q96RJ0 339 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 MYOZ2Q9NPC6 264 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 COPEO14579 308 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 CFLARO15519 480 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 RASSF9O75901 435 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 PMLP29590 882 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 PRKCEQ02156 737 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 KCNA1Q09470 495 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 NR1H3Q13133 447 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 STAT4Q14765 748 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 C1orf228Q6PIY5 440 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 FOXR2Q6PJQ5 311 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ENOSF1Q7L5Y1 443 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 EXT2Q93063 718 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 PPWD1Q96BP3 646 aaKnown RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 POLIQ9UNA4 740 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 C15orf41Q9Y2V0 281 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 KRT7P08729 469 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ESRRAP11474 423 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ALDH5A1P51649 535 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 EFNA5P52803 228 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 TGFB2P61812 414 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 LRRC57Q8N9N7 239 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 HIPK4Q8NE63 616 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATL2Q8NHH9 583 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATP8B4Q8TF62 1192 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 TAS2R14Q9NYV8 317 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms