RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SYN3O14994 580 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
CSF1R-208ENST00000515239 CPA1P15085 419 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
CSF1R-208ENST00000515239 ELF2Q15723 593 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 EEF1DP3Q658K8 133 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 CDCA2Q69YH5 1023 aaPredicted RBP12.99□□□□□ -0.33
CSF1R-208ENST00000515239 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 FSTL4Q6MZW2 842 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 Q6ZUG5 572 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 PDZD3Q86UT5 571 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 PROSER1Q86XN7 944 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 TMC8Q8IU68 726 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 ABCA7Q8IZY2 2146 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 BRF1Q92994 677 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 CHFRQ96EP1 664 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
CSF1R-208ENST00000515239 AFF4Q9UHB7 1163 aaKnown RBP12.99□□□□□ -0.33
CSF1R-208ENST00000515239 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 CACNA1EQ15878 2313 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 SMIM28A0A1B0GU29 152 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 MEFVO15553 781 aaPredicted RBP12.98□□□□□ -0.33
CSF1R-208ENST00000515239 VNN2O95498 520 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 EDN1P05305 212 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
CSF1R-208ENST00000515239 IRX4P78413 519 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 FGD1P98174 961 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
CSF1R-208ENST00000515239 CTXN3Q4LDR2 81 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 FBRSL1Q9HCM7 1045 aaKnown RBP12.98□□□□□ -0.33
CSF1R-208ENST00000515239 OBP2AQ9NY56 170 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 EBF1Q9UH73 591 aa12.98□□□□□ -0.33
CSF1R-208ENST00000515239 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
CSF1R-208ENST00000515239 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
CSF1R-208ENST00000515239 ASH1LQ9NR48 2969 aaKnown RBP12.97□□□□□ -0.33
CSF1R-208ENST00000515239 NUP205Q92621 2012 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 ACKR2O00590 384 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 TRDMT1O14717 391 aaKnown RBP12.97□□□□□ -0.33
CSF1R-208ENST00000515239 RARRES1P49788 294 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 UAP1L1Q3KQV9 507 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 ITPRIPL2Q3MIP1 535 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 XKR4Q5GH76 650 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 MAEAQ7L5Y9 396 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 PIGOQ8TEQ8 1089 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 BBC3Q96PG8 261 aaPredicted RBP12.97□□□□□ -0.33
CSF1R-208ENST00000515239 HHIPQ96QV1 700 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 EIF2AK1Q9BQI3 630 aaKnown RBP12.97□□□□□ -0.33
CSF1R-208ENST00000515239 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 CCDC113Q9H0I3 377 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 DNAJC25Q9H1X3 360 aa12.97□□□□□ -0.33
CSF1R-208ENST00000515239 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 OTOL1A6NHN0 477 aaPredicted RBP12.96□□□□□ -0.33
CSF1R-208ENST00000515239 DPYSL4O14531 572 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
CSF1R-208ENST00000515239 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 GRSF1Q12849 480 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSF1R-208ENST00000515239 KRT32Q14532 448 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 GALNT17Q6IS24 598 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 FBXL16Q8N461 479 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 BSNDQ8WZ55 320 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 CRISPLD1Q9H336 500 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 NCOA5Q9HCD5 579 aaKnown RBP12.96□□□□□ -0.33
CSF1R-208ENST00000515239 INVSQ9Y283 1065 aa12.96□□□□□ -0.33
CSF1R-208ENST00000515239 PODXLO00592 558 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 USO1O60763 962 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 RNF40O75150 1001 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 EGFP01133 1207 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 XRCC6P12956 609 aaKnown RBP eCLIP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 WEE1P30291 646 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 CCT2P78371 535 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 MAPK6Q16659 721 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 COL28A1Q2UY09 1125 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 PMS2CLQ68D20 193 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 SYT13Q7L8C5 426 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 ZBTB8OSQ8IWT0 167 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 SUSD3Q96L08 255 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
CSF1R-208ENST00000515239 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 FAM83CQ9BQN1 747 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 AGXT2Q9BYV1 514 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 GKN1Q9NS71 199 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
CSF1R-208ENST00000515239 YIPF1Q9Y548 306 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms