RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
SMAD5-210ENST00000515005 C3orf58Q8NDZ4 430 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 OR2I1PQ8NGU4 316 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 TCP11Q8WWU5 503 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 TMEM87BQ96K49 555 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 MTA3Q9BTC8 594 aa13.07□□□□□ -0.32
SMAD5-210ENST00000515005 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
SMAD5-210ENST00000515005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 TBX3O15119 743 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 SH3BP5O60239 455 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 OPHN1O60890 802 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 RECQL4O94761 1208 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 CFIP05156 583 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMAD5-210ENST00000515005 RFC5P40937 340 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 LIFRP42702 1097 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 ABCG1P45844 678 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 GALK1P51570 392 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMAD5-210ENST00000515005 PTPAQ15257 358 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 MAPK6Q16659 721 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 MARCH9Q86YJ5 346 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
SMAD5-210ENST00000515005 TMC8Q8IU68 726 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
SMAD5-210ENST00000515005 TSTD1Q8NFU3 115 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 BPIFB1Q8TDL5 484 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 LRRC2Q9BYS8 371 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 HPS4Q9NQG7 708 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 OBP2AQ9NY56 170 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
SMAD5-210ENST00000515005 FBXL5Q9UKA1 691 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
SMAD5-210ENST00000515005 TNFRSF10BO14763 440 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 MCM5P33992 734 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 MINDY1Q8N5J2 469 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 FRMD1Q8N878 549 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SMAD5-210ENST00000515005 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 PCDHB9Q9Y5E1 797 aa13.05□□□□□ -0.32
SMAD5-210ENST00000515005 CEP192Q8TEP8 1941 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 EML1O00423 815 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 DRD1P21728 446 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 ITPKBP27987 946 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 MCM2P49736 904 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 RUNX3Q13761 415 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 CAPSQ13938 189 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 MXD4Q14582 209 aaPredicted RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 UPP1Q16831 310 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 GAREM2Q75VX8 874 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 RASSF3Q86WH2 238 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 ACDQ96AP0 544 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 FAM83CQ9BQN1 747 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 SMG9Q9H0W8 520 aaKnown RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 PRORYQ9H606 182 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 POLMQ9NP87 494 aaPredicted RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 XPNPEP1Q9NQW7 623 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
SMAD5-210ENST00000515005 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 KNTC1P50748 2209 aa13.04□□□□□ -0.32
SMAD5-210ENST00000515005 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 TEP1Q99973 2627 aaKnown RBP13.03□□□□□ -0.32
SMAD5-210ENST00000515005 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 ITPKAP23677 461 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 CFHR1Q03591 330 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
SMAD5-210ENST00000515005 POU5F1BQ06416 359 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 PSMD2Q13200 908 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 TFDP1Q14186 410 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 MRPL58Q14197 206 aaKnown RBP13.03□□□□□ -0.32
SMAD5-210ENST00000515005 FBXO43Q4G163 708 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 CNOT6LQ96LI5 555 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms