RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 CDH6P55285 790 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 DPYDQ12882 1025 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 BBS9Q3SYG4 887 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 GLRA4Q5JXX5 417 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 DDX42Q86XP3 938 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 SIRT2Q8IXJ6 389 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 SPATA17Q96L03 361 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 DCLK3Q9C098 648 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 PLEKHA4Q9H4M7 779 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 TMEM8AQ9HCN3 771 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 EPB41L4AQ9HCS5 686 aaPredicted RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 FAM49BQ9NUQ9 324 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 TMEM51Q9NW97 253 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF521Q96K83 1311 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 MROH1Q8NDA8 1641 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 C3orf70A6NLC5 250 aaPredicted RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 KIF3CO14782 793 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 MCF2P10911 925 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ATP6V1E1P36543 226 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 RASSF2P50749 326 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 LAMTOR4Q0VGL1 99 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 MFSD4BQ5TF39 518 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 PPP4R4Q6NUP7 873 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF438Q7Z4V0 828 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ATL2Q8NHH9 583 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 OSCP1Q8WVF1 389 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 RIPOR3Q96MK2 946 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ZMYND12Q9H0C1 365 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 LMBRD1Q9NUN5 540 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 GIMAP4Q9NUV9 329 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 GJB1P08034 283 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 LAG3P18627 525 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 FAM110CQ1W6H9 321 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 PABPC1LQ4VXU2 614 aaKnown RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 PPP2R2DQ66LE6 453 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ALKBH5Q6P6C2 394 aaKnown RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 RBBP8NLQ8NC74 664 aaPredicted RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
CCDC30-214ENST00000514642 KLHL11Q9NVR0 708 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 RNF14Q9UBS8 474 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ITGA11Q9UKX5 1188 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 GAKO14976 1311 aa7.87□□□□□ -1.15
CCDC30-214ENST00000514642 ANP32DO95626 131 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ERVK-10P10266 1014 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CYP11B2P19099 503 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 RHOT1Q8IXI2 618 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CACNA2D3Q8IZS8 1091 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 FAM71BQ8TC56 605 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CIPCQ9C0C6 399 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 KDM4CQ9H3R0 1056 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SPACA6W5XKT8 324 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 MSH4O15457 936 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SLC1A1P43005 524 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 DBN1Q16643 649 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 NIPA1Q7RTP0 329 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 KRT35Q92764 455 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ADAM2Q99965 735 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 UMODL1Q5DID0 1318 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 MEI4A8MW99 385 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 GNGT2O14610 69 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CASQ2O14958 399 aaPredicted RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 LUC7L3O95232 432 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SMIM10L2AP0DMW4 78 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SMIM10L2BP0DMW5 78 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 RPA1P27694 616 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SREBF1P36956 1147 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 FXR2P51116 673 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 DCAF6Q58WW2 860 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SLC27A1Q6PCB7 646 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 PID1Q7Z2X4 250 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 MSL3Q8N5Y2 521 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 OR6P1Q8NGX9 317 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 IGDCC4Q8TDY8 1250 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 GIPC2Q8TF65 315 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 FGD4Q96M96 766 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 FDXACB1Q9BRP7 624 aaPredicted RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 TLE6Q9H808 572 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ASAH2Q9NR71 780 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 BFARQ9NZS9 450 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 KIAA1257Q9ULG3 409 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 FZD1Q9UP38 647 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CNTNAP5Q8WYK1 1306 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 PGK1P00558 417 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 HLA-DRAP01903 254 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 IL9RQ01113 521 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ANKS6Q68DC2 871 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 OVOS1Q6IE37 1185 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 NMRK2Q9NPI5 230 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 SPG21Q9NZD8 308 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 TSR3Q9UJK0 312 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 NFIBO00712 420 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 MAPK13O15264 365 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 RTN2O75298 545 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CENPCQ03188 943 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms