RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SEC24AO95486 1093 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 PRAMEF12O95522 483 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 POU2F2P09086 479 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TKTP29401 623 aaKnown RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 CDR1P51861 262 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 SEC13P55735 322 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 NFKB2Q00653 900 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TWF1Q12792 350 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 NMIQ13287 307 aaPredicted RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 DUOXA1Q1HG43 343 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 DHRS13Q6UX07 377 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CYB5R4Q7L1T6 521 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 HEATR3Q7Z4Q2 680 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ZNF410Q86VK4 478 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CCDC33Q8N5R6 958 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ZNF461Q8TAF7 563 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 SHKBP1Q8TBC3 707 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 KIF2CQ99661 725 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 POLR3CQ9BUI4 534 aaPredicted RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 TRPV4Q9HBA0 871 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CPNE5Q9HCH3 593 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 AVENQ9NQS1 362 aaPredicted RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 GKN1Q9NS71 199 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ZBTB40Q9NUA8 1239 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TOR4AQ9NXH8 423 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 MTRRQ9UBK8 725 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 SALL3Q9BXA9 1300 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TLN1Q9Y490 2541 aaKnown RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 IFIT3O14879 490 aaKnown RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 B3GAT3O94766 335 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 SERPINF2P08697 491 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ATF2P15336 505 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 RXRAP19793 462 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CCR10P46092 362 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 GALK1P51570 392 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 RPL6Q02878 288 aaKnown RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 TLE3Q04726 772 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 GRIK3Q13003 919 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 NBR1Q14596 966 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 PLEKHG6Q3KR16 790 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 C11orf74Q86VG3 221 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 RASEFQ8IZ41 740 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 PGBD3Q8N328 593 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 GALNT15Q8N3T1 639 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 DAGLBQ8NCG7 672 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 EZH1Q92800 747 aaPredicted RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 SPACA7Q96KW9 195 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ANO3Q9BYT9 981 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CXCL16Q9H2A7 254 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 CAPN10Q9HC96 672 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ZDHHC4Q9NPG8 344 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 BCCIPQ9P287 314 aaKnown RBP eCLIP3.62□□□□□ -1.83
CHD1-211ENST00000514344 PCOLCE2Q9UKZ9 415 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 COL4A3BPQ9Y5P4 624 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 ZMYM6O95789 1325 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TNRC6BQ9UPQ9 1833 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 PTPRDP23468 1912 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CEP192Q8TEP8 1941 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ARHGEF37A1IGU5 675 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CBFA2T3O75081 653 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PLEKHA8P1O95397 391 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CDC42EP1Q00587 391 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 SPIRE1Q08AE8 756 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 KCNH2Q12809 1159 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 MYO1EQ12965 1108 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 TUSC3Q13454 348 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 RUNX3Q13761 415 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 SART3Q15020 963 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 ZNF746Q6NUN9 644 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 RAB11FIP4Q86YS3 637 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 SMAP1Q8IYB5 467 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 RGL4Q8IZJ4 473 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 RNF149Q8NC42 400 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CNNM3Q8NE01 707 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 BPIFB1Q8TDL5 484 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 HMGB4Q8WW32 186 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 BAP1Q92560 729 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 GJA10Q969M2 543 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ACDQ96AP0 544 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 E2F7Q96AV8 911 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ERLEC1Q96DZ1 483 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 DDX27Q96GQ7 796 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 CNOT6LQ96LI5 555 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 P2RY13Q9BPV8 354 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 KRT23Q9C075 422 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ATXN3LQ9H3M9 355 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 FZD8Q9H461 694 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 DISC1Q9NRI5 854 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 DNAAF2Q9NVR5 837 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 HEMK1Q9Y5R4 338 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 TTC41PQ6P2S7 1318 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PCDH15Q96QU1 1955 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ERICH2A1L162 156 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 WDR64B1ANS9 1081 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 INO80B-WBP1J3KQ70 363 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 TRDMT1O14717 391 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 MAFO75444 373 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 GJB3O75712 270 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 MICAL2O94851 1124 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 SYPP08247 313 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms