RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SP2Q02086 613 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PPIGQ13427 754 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 GPNMBQ14956 572 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PGM5Q15124 567 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 FAM47CQ5HY64 1035 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 ARHGEF16Q5VV41 709 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 FILIP1Q7Z7B0 1213 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 DEFB128Q7Z7B8 93 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 NAT16Q8N8M0 369 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 NCOA7Q8NI08 942 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 NSUN6Q8TEA1 469 aaKnown RBP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 RUFY2Q8WXA3 655 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PTPRN2Q92932 1015 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PDCD2LQ9BRP1 358 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 MTG1Q9BT17 334 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 AMNQ9BXJ7 453 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 CARS2Q9HA77 564 aaKnown RBP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 TMEFF2Q9UIK5 374 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 MRPL11Q9Y3B7 192 aaKnown RBP7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PRKAB1Q9Y478 270 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 PCDHA1Q9Y5I3 950 aa7.33□□□□□ -1.24
HMGN1P17-201ENST00000513734 C5orf42Q9H799 3197 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 LOC102724159A0A0B4J2E5 919 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 SH2B2O14492 632 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 FGF10O15520 208 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 MEFVO15553 781 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 PRC1O43663 620 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 DNAJC6O75061 913 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 PAMP19021 973 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 ENDOUP21128 410 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 UBA1P22314 1058 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 MRPS9P82933 396 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 ZNF200P98182 395 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 GHRHRQ02643 423 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 TRDNQ13061 729 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 NECTIN1Q15223 517 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 PWP2Q15269 919 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 KCNT2Q6UVM3 1135 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 SPRED2Q7Z698 418 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 TMCO2Q7Z6W1 182 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 RALYLQ86SE5 291 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 TMEM199Q8N511 208 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 SRBD1Q8N5C6 995 aaKnown RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 MAFAQ8NHW3 353 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 BCL7CQ8WUZ0 217 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 HERVK_113Q902F9 699 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 TIFAQ96CG3 184 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 MFSD3Q96ES6 412 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 PTCHD1Q96NR3 888 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 PRDM12Q9H4Q4 367 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 TRAF6Q9Y4K3 522 aa7.32□□□□□ -1.24
HMGN1P17-201ENST00000513734 FRMPD4Q14CM0 1322 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 ARNTLO00327 626 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 ADAMTS3O15072 1205 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 NKRFO15226 690 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 MED26O95402 600 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 GH1P01241 217 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 CPA1P15085 419 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 FOSL2P15408 326 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 SSTR4P31391 388 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 MASP1P48740 699 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 NT5C2P49902 561 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 STXBP2Q15833 593 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 RALGAPA2Q2PPJ7 1873 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 ADCK5Q3MIX3 580 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 HSDL1Q3SXM5 330 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 TRIM61Q5EBN2 209 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 NFRKBQ6P4R8 1299 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 USP17L6PQ6QN14 398 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 DIO2Q92813 273 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 IWS1Q96ST2 819 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 PHF20Q9BVI0 1012 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 HDAC6Q9UBN7 1215 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
HMGN1P17-201ENST00000513734 ERICH2A1L162 156 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 EPOPA6NHQ4 379 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 GCOM1H8Y6P7 765 aaPredicted RBP7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 RFXAPO00287 272 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 MEIS2O14770 477 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 EFCAB14O75071 495 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 EIF3JO75822 258 aaKnown RBP7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 GGPS1O95749 300 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 FGBP02675 491 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 POLR2MP0CAP2 368 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 CD8BP10966 210 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 ITGB7P26010 798 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 LTBRP36941 435 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 ZP2Q05996 745 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 LAPTM5Q13571 262 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 PTGISQ16647 500 aa7.3□□□□□ -1.24
HMGN1P17-201ENST00000513734 UBE2SQ16763 222 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms