RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LBX2Q6XYB7 198 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 C16orf59Q7L2K0 433 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 G2E3Q7L622 706 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 RNF180Q86T96 592 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 GLCCI1Q86VQ1 547 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 FOXP4Q8IVH2 680 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 PPIL6Q8IXY8 311 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 TMEM199Q8N511 208 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 VGLL2Q8N8G2 317 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 BTN2A2Q8WVV5 523 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 LPIN2Q92539 896 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 CHAMP1Q96JM3 812 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 PUS3Q9BZE2 481 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 PORCNQ9H237 461 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 C9orf78Q9NZ63 289 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 PUF60Q9UHX1 559 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 INPP5FQ9Y2H2 1132 aa4.5□□□□□ -1.69
PDLIM5-218ENST00000513341 GAKO14976 1311 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 MROH7Q68CQ1 1323 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 GPR75-ASB3A0A0A6YYF3 556 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 IGSF3O75054 1194 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 ALDH1L1O75891 902 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 ITGAVP06756 1048 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 LDHCP07864 332 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 SNRPB2P08579 225 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 LCP1P13796 627 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 CYP2C19P33261 490 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 KCNQ1P51787 676 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 EPHA5P54756 1037 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 C21orf58P58505 322 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 TFF2Q03403 129 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 TUSC3Q13454 348 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 PUM3Q15397 648 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 METTL24Q5JXM2 366 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 EPHA10Q5JZY3 1008 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 COLEC12Q5KU26 742 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 SPTY2D1Q68D10 685 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 DPP9Q86TI2 863 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 TRPV1Q8NER1 839 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 UHMK1Q8TAS1 419 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 RASGRP4Q8TDF6 673 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 NTN5Q8WTR8 489 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 NUP133Q8WUM0 1156 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 FERMT2Q96AC1 680 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 GPRASP2Q96D09 838 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 C12orf42Q96LP6 360 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 PCGF6Q9BYE7 350 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 SEZ6LQ9BYH1 1024 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 ZDHHC5Q9C0B5 715 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 DHX36Q9H2U1 1008 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 FLRT1Q9NZU1 646 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 PI4KBQ9UBF8 816 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 DENND2AQ9ULE3 1009 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 PCDHGB7Q9Y5F8 929 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 CHD9Q3L8U1 2897 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 TRANK1O15050 2925 aa4.49□□□□□ -1.69
PDLIM5-218ENST00000513341 ELP1O95163 1332 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 MYH2Q9UKX2 1941 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 SMCHD1A6NHR9 2005 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 A0A0A6YYK5 440 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 GRXCR1A8MXD5 290 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 FGBP02675 491 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 RARBP10826 455 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 PRDX5P30044 214 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 GJA4P35212 333 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 ECI1P42126 302 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 CDK7P50613 346 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 USP14P54578 494 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 GFRA1P56159 465 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 GRIN1Q05586 938 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 PAK2Q13177 524 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 WDR43Q15061 677 aaKnown RBP eCLIP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 TWISTNBQ3B726 338 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 RABL6Q3YEC7 729 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 DENND5AQ6IQ26 1287 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 SYCE2Q6PIF2 218 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 CATSPERGQ6ZRH7 1159 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 ZNF365Q70YC5 407 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 CXXC5Q7LFL8 322 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 OTOP3Q7RTS5 596 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 BHLHA9Q7RTU4 235 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 CCDC146Q8IYE0 955 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 ABRAQ8N0Z2 381 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 TSPYL6Q8N831 410 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 SLC43A3Q8NBI5 491 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 SHCBP1Q8NEM2 672 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 C1orf159Q96HA4 380 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 SEC16BQ96JE7 1060 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 TACO1Q9BSH4 297 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 PAGR1Q9BTK6 254 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 C12orf65Q9H3J6 166 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 MROH8Q9H579 483 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 CAPN10Q9HC96 672 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 IL23AQ9NPF7 189 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 XPNPEP3Q9NQH7 507 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 HOXC10Q9NYD6 342 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 GPRC5BQ9NZH0 403 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 PTGFRNQ9P2B2 879 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 FBXO10Q9UK96 956 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms