RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TTC26A0AVF1 554 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 CEBPBP17676 345 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 TYMPP19971 482 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 FCARP24071 287 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 WEE1P30291 646 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 CDC25AP30304 524 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 MCM2P49736 904 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 ARPP19P56211 112 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 ATP2C1P98194 919 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-216ENST00000512683 MYBPC2Q14324 1141 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 USP37Q86T82 979 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 ZNF687Q8N1G0 1237 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 CELF5Q8N6W0 485 aaKnown RBP13.69□□□□□ -0.22
VEGFA-216ENST00000512683 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-216ENST00000512683 C18orf25Q96B23 403 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-216ENST00000512683 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 HEBP1Q9NRV9 189 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 ODF2LQ9ULJ1 636 aa13.69□□□□□ -0.22
VEGFA-216ENST00000512683 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 CITO14578 2027 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 SFI1A8K8P3 1242 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 ZNF263O14978 683 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 PIGRP01833 764 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 CD72P21854 359 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 CCR3P51677 355 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 EPHB3P54753 998 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 SLC12A3P55017 1021 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 GPR17Q13304 367 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 ZBTB45Q96K62 511 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-216ENST00000512683 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-216ENST00000512683 OBP2AQ9NY56 170 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 CEP72Q9P209 647 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 NCDNQ9UBB6 729 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 ZMYM5Q9UJ78 669 aa13.68□□□□□ -0.22
VEGFA-216ENST00000512683 VWA8A3KMH1 1905 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 CHADO15335 359 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 MOSPD3O75425 235 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 BMP15O95972 392 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 CPB1P15086 417 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 CNR2P34972 360 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 CCR2P41597 374 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
VEGFA-216ENST00000512683 NCKAP1LP55160 1127 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 LMNB2Q03252 620 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 TWF1Q12792 350 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 SMARCB1Q12824 385 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 ARMCX5Q6P1M9 558 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 POTEHQ6S545 545 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 HAUS6Q7Z4H7 955 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 ZSCAN18Q8TBC5 510 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-216ENST00000512683 FAM3CQ92520 227 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 TCEAL4Q96EI5 215 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 DERAQ9Y315 318 aa13.67□□□□□ -0.22
VEGFA-216ENST00000512683 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
VEGFA-216ENST00000512683 H3BQV1 296 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 OGTO15294 1046 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 LRP3O75074 770 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 PAPSS2O95340 614 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 GDI1P31150 447 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 LIG4P49917 911 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 FCHO2Q0JRZ9 810 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 MTAPQ13126 283 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 CUL4AQ13619 759 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 TMEM119Q4V9L6 283 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 SPATA1Q5VX52 437 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 VITQ6UXI7 678 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 DSTYKQ6XUX3 929 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 RNF19BQ6ZMZ0 732 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 ITIH5Q86UX2 942 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 YAF2Q8IY57 180 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 SYNPOQ8N3V7 929 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 PNMA5Q96PV4 448 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 LRRC3Q9BY71 257 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 LMAN1LQ9HAT1 526 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 ANKFY1Q9P2R3 1169 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 RAB23Q9ULC3 237 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
VEGFA-216ENST00000512683 SMG5Q9UPR3 1016 aaKnown RBP13.66□□□□□ -0.22
VEGFA-216ENST00000512683 VPS13AQ96RL7 3174 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 A0A0B4J269 797 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 SOBPA7XYQ1 873 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 HEPACAM2A8MVW5 462 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 CXCL8P10145 99 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
VEGFA-216ENST00000512683 MYL4P12829 197 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 HOXA6P31267 233 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
VEGFA-216ENST00000512683 CXCL12P48061 93 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms