RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 GNA15P30679 374 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 CDK7P50613 346 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 GALCP54803 685 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
SCLT1-209ENST00000511426 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
SCLT1-209ENST00000511426 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
SCLT1-209ENST00000511426 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 SYCE1Q8N0S2 351 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 SMG8Q8ND04 991 aaKnown RBP16.26■□□□□ 0.19
SCLT1-209ENST00000511426 SH3TC2Q8TF17 1288 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 SLC20A1Q8WUM9 679 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 FAM84AQ96KN4 292 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 ZNF518BQ9C0D4 1074 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■■ 94.8
SCLT1-209ENST00000511426 PADI3Q9ULW8 664 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 AGAP1Q9UPQ3 857 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 CITO14578 2027 aa16.26■□□□□ 0.19
SCLT1-209ENST00000511426 SMIM28A0A1B0GU29 152 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 FANCGO15287 622 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 LSM8O95777 96 aaKnown RBP16.25■□□□□ 0.19
SCLT1-209ENST00000511426 ABL1P00519 1130 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 CKBP12277 381 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 TNNC1P63316 161 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 TUBB4BP68371 445 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 INCA1Q0VD86 236 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 BFSP2Q13515 415 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 VCPIP1Q96JH7 1222 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 UNC93B1Q9H1C4 597 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 PARP2Q9UGN5 583 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 KIAA1257Q9ULG3 409 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 MRFAP1Q9Y605 127 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
SCLT1-209ENST00000511426 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 MED7O43513 233 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CAPN15O75808 1086 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 MMEP08473 750 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 ITGA4P13612 1032 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 LRPAP1P30533 357 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 GPC5P78333 572 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 DSC3Q14574 896 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 LPIN1Q14693 890 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CLEC16AQ2KHT3 1053 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 ACAD10Q6JQN1 1059 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CDC23Q9UJX2 597 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PCDHGC3Q9UN70 934 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CAPN6Q9Y6Q1 641 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 MTA2O94776 668 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PARNO95453 639 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 FTLP02792 175 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 UNGP13051 313 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 NAP1L1P55209 391 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CENPCQ03188 943 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 WHAMMP3Q1A5X7 153 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 ZNF618Q5T7W0 954 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 C9orf57Q5W0N0 161 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PACSIN1Q9BY11 444 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 AGO3Q9H9G7 860 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 UVRAGQ9P2Y5 699 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 BARX2Q9UMQ3 279 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-209ENST00000511426 TFR2Q9UP52 801 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 HES2Q9Y543 173 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 CEP83Q9Y592 693 aa16.24■□□□□ 0.19
SCLT1-209ENST00000511426 PIRO00625 290 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 CILPO75339 1184 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 MOCS3O95396 460 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 GHRP10912 638 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 CCL5P13501 91 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 TCP1P17987 556 aaKnown RBP16.23■□□□□ 0.19
SCLT1-209ENST00000511426 AKAP5P24588 427 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 STILQ15468 1287 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 SV2CQ496J9 727 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 DPH6Q7L8W6 267 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 FAM126BQ8IXS8 530 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 ZNF606Q8WXB4 792 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 PCDHB18PQ96TA0 734 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 PDCL3Q9H2J4 239 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 AVENQ9NQS1 362 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-209ENST00000511426 GDAP2Q9NXN4 497 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 SAR1BQ9Y6B6 198 aa16.23■□□□□ 0.19
SCLT1-209ENST00000511426 INPPL1O15357 1258 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 THAP12O43422 761 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 CD52P31358 61 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 CDH5P33151 784 aaPredicted RBP16.22■□□□□ 0.19
SCLT1-209ENST00000511426 NSFP46459 744 aaKnown RBP16.22■□□□□ 0.19
SCLT1-209ENST00000511426 AMPD2Q01433 879 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms