RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ALDH6A1Q02252 535 aaKnown RBP5.73□□□□□ -1.49
NEK1-204ENST00000509912 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.73□□□□□ -1.49
NEK1-204ENST00000509912 FBXO18Q8NFZ0 1043 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 CLEC4DQ8WXI8 215 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 RSPH1Q8WYR4 309 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 LENG1Q96BZ8 264 aaPredicted RBP5.73□□□□□ -1.49
NEK1-204ENST00000509912 YIPF2Q9BWQ6 316 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 ARHGAP39Q9C0H5 1083 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 C7orf69Q9H7B7 122 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 ZNF287Q9HBT7 754 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 MKL2Q9ULH7 1088 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 PCDHA13Q9Y5I0 950 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 H0YGN5 161 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 HMGCRP04035 888 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 RPLP2P05387 115 aaKnown RBP5.73□□□□□ -1.49
NEK1-204ENST00000509912 PDCP20941 246 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 ENPP1P22413 925 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 SMARCA1P28370 1054 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 CACNB3P54284 484 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 BACE1P56817 501 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 TEKQ02763 1124 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 G3BP1Q13283 466 aaKnown RBP eCLIP5.73□□□□□ -1.49
NEK1-204ENST00000509912 IL10RAQ13651 578 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 RALGPS1Q5JS13 557 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 TMEM240Q5SV17 173 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 OGFOD3Q6PK18 319 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 CATSPERGQ6ZRH7 1159 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 RAET1EQ8TD07 263 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 PLEKHO2Q8TD55 490 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 HPS3Q969F9 1004 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 MMP19Q99542 508 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 MAP3K14Q99558 947 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 IMPACTQ9P2X3 320 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 GPR45Q9Y5Y3 372 aa5.73□□□□□ -1.49
NEK1-204ENST00000509912 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PRSS38A1L453 326 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 AGR2O95994 175 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PIK3CBP42338 1070 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PSMC4P43686 418 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 MANFP55145 182 aaKnown RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 GRB14Q14449 540 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 LRRC24Q50LG9 513 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PRAMEF9Q5VWM5 478 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 CXorf67Q86X51 503 aaPredicted RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 FAM186BQ8IYM0 893 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 SH2D3CQ8N5H7 860 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 ENAHQ8N8S7 591 aaPredicted RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 ZKSCAN4Q969J2 545 aaPredicted RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 SHISA4Q96DD7 197 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PLCD4Q9BRC7 762 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 RIOK1Q9BRS2 568 aaKnown RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 USP40Q9NVE5 1235 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 HOXC10Q9NYD6 342 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 CPA4Q9UI42 421 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 MYH8P13535 1937 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 A0A1B0GUL7 405 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PDHXO00330 501 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 ESR1P03372 595 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 CCL5P13501 91 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 LSP1P33241 339 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 OXCT1P55809 520 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 PHC1P78364 1004 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 TRAF1Q13077 416 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.72□□□□□ -1.49
NEK1-204ENST00000509912 ATAT1Q5SQI0 421 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 BTNL9Q6UXG8 535 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 AIFM3Q96NN9 605 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 NOL10Q9BSC4 688 aaKnown RBP5.72□□□□□ -1.49
NEK1-204ENST00000509912 KCTD10Q9H3F6 313 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 VPS45Q9NRW7 570 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 USP18Q9UMW8 372 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 NR2E3Q9Y5X4 410 aa5.72□□□□□ -1.49
NEK1-204ENST00000509912 CCDC154A6NI56 674 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 DDX3XO00571 662 aaKnown RBP eCLIP5.71□□□□□ -1.49
NEK1-204ENST00000509912 WDR46O15213 610 aaKnown RBP5.71□□□□□ -1.49
NEK1-204ENST00000509912 HLA-DOAP06340 250 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 EDNRBP24530 442 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 ALDH5A1P51649 535 aaPredicted RBP5.71□□□□□ -1.49
NEK1-204ENST00000509912 GPR19Q15760 415 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 FSCN1Q16658 493 aaKnown RBP5.71□□□□□ -1.49
NEK1-204ENST00000509912 PGS1Q32NB8 556 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 KLHDC7AQ5VTJ3 777 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 CEP85Q6P2H3 762 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 CCDC129Q6ZRS4 1044 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 TMEM179Q6ZVK1 233 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 FTSJ3Q8IY81 847 aaKnown RBP5.71□□□□□ -1.49
NEK1-204ENST00000509912 TSPEARQ8WU66 669 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 DCTPP1Q9H773 170 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 TMX2Q9Y320 296 aa5.71□□□□□ -1.49
NEK1-204ENST00000509912 TRIM75PA6NK02 468 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 TBX3O15119 743 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 DGKIO75912 1065 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 CABYRO75952 493 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 NAT1P18440 290 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 RFC2P35250 354 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 RGS2P41220 211 aa5.71□□□□□ -1.5
NEK1-204ENST00000509912 KIR3DL1P43629 444 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms