RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 C2CD2Q9Y426 696 aa18.79■□□□□ 0.6
NUP54-205ENST00000507257 H0Y3Z8 333 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 HOXA13P31271 388 aaPredicted RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 RPS6KA3P51812 740 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 SLC34A1Q06495 639 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 ADCY1Q08828 1119 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 KRT72Q14CN4 511 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 SLC5A9Q2M3M2 681 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 P3H1Q32P28 736 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 EFHC2Q5JST6 749 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 SNX30Q5VWJ9 437 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 CDC42EP5Q6NZY7 148 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 TMEM179Q6ZVK1 233 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 SEMA4DQ92854 862 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 LXNQ9BS40 222 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 COA1Q9GZY4 146 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 UNC45AQ9H3U1 944 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 DLGAP2Q9P1A6 1054 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 STX18Q9P2W9 335 aaKnown RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 UMODL1Q5DID0 1318 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 TM9SF1O15321 606 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 GSC2O15499 205 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 CHMP2AO43633 222 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 IL1BP01584 269 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 PLS3P13797 630 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 VPS41P49754 854 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 AP1B1Q10567 949 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 CCDC6Q16204 474 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 PADI6Q6TGC4 694 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 PRUNE1Q86TP1 453 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 RNF217Q8TC41 542 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 TMC2Q8TDI7 906 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 ALKBH8Q96BT7 664 aaKnown RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
NUP54-205ENST00000507257 TEKT3Q9BXF9 490 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 VPS11Q9H270 941 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 SYNCQ9H7C4 482 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 EHMT1Q9H9B1 1298 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 ACP6Q9NPH0 428 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 ZNF212Q9UDV6 495 aa18.78■□□□□ 0.6
NUP54-205ENST00000507257 MAGEA13PA6NCF6 341 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 A8MXQ7 604 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 ZC3H11AO75152 810 aaKnown RBP eCLIP18.77■□□□□ 0.62e-6■■■■□ 20.6
NUP54-205ENST00000507257 TGDSO95455 350 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 GCNT1Q02742 428 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 CERKLQ49MI3 558 aaPredicted RBP18.77■□□□□ 0.6
NUP54-205ENST00000507257 CEP55Q53EZ4 464 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 TATDN1Q6P1N9 297 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 LRRC74BQ6ZQY2 392 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 MTDHQ86UE4 582 aaKnown RBP18.77■□□□□ 0.6
NUP54-205ENST00000507257 ZNF276Q8N554 614 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
NUP54-205ENST00000507257 NSL1Q96IY1 281 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 RIT2Q99578 217 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 PDP2Q9P2J9 529 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
NUP54-205ENST00000507257 PSMG1O95456 288 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 NDUFB10O96000 172 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 ADRB2P07550 413 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 RFC5P40937 340 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 CETN2P41208 172 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 HSPA2P54652 639 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 KCNQ4P56696 695 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 KPNB1Q14974 876 aaKnown RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 RCN1Q15293 331 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 LVRNQ6Q4G3 990 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 DHX38Q92620 1227 aaKnown RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 GATA6Q92908 595 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 NR1H4Q96RI1 486 aaPredicted RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 KANSL3Q9P2N6 904 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 DRG1Q9Y295 367 aaKnown RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 AP1G2O75843 785 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 HAUS5O94927 633 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 FGFR1P11362 822 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 BMP3P12645 472 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 PLEKHG4Q58EX7 1191 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.76■□□□□ 0.59
NUP54-205ENST00000507257 FBXL13Q8NEE6 735 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 SCG3Q8WXD2 468 aaKnown RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 VCPIP1Q96JH7 1222 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 DDX43Q9NXZ2 648 aaKnown RBP18.76■□□□□ 0.59
NUP54-205ENST00000507257 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
NUP54-205ENST00000507257 TISP43B9A030 160 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 ATP2A1O14983 1001 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 LIASO43766 372 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 TJP3O95049 919 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 CYP1A1P04798 512 aaPredicted RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 HOXA10P31260 410 aaPredicted RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 RCN2Q14257 317 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 ACSBG2Q5FVE4 666 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms