RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TAF6P49848 677 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 BCAR1P56945 870 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 LILRA4P59901 499 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 ZNF667Q5HYK9 610 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 WDR44Q5JSH3 913 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
RNF4-208ENST00000507247 HASPINQ8TF76 798 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 TAF4BQ92750 862 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 KAT5Q92993 513 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 RAD9AQ99638 391 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 IMPG2Q9BZV3 1241 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 TTYH3Q9C0H2 523 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 MARCH5Q9NX47 278 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 TMEM189-UBE2V1I3L0A0 370 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 B3GAT3O94766 335 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 CLSTN1O94985 981 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 MYOGP15173 224 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 UCHL3P15374 230 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 PNPLA4P41247 253 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 ASPAP45381 313 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 BRCC3P46736 316 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 AARSP49588 968 aaKnown RBP eCLIP15.23■□□□□ 0.03
RNF4-208ENST00000507247 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 WDR72Q3MJ13 1102 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 SV2CQ496J9 727 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 DCLRE1AQ6PJP8 1040 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 SCARA5Q6ZMJ2 495 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 RRAGAQ7L523 313 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 TMEM173Q86WV6 379 aaPredicted RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 CCDC150Q8NCX0 1101 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 BCL7CQ8WUZ0 217 aaPredicted RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 KREMEN1Q96MU8 473 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 ARID3AQ99856 593 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 NAA15Q9BXJ9 866 aaKnown RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 NIF3L1Q9GZT8 377 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 FAN1Q9Y2M0 1017 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 R3HCC1Q9Y3T6 440 aaKnown RBP15.23■□□□□ 0.03
RNF4-208ENST00000507247 PLXNA4Q9HCM2 1894 aa15.23■□□□□ 0.03
RNF4-208ENST00000507247 KPNA7A9QM74 516 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 I3L4J1 428 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 RNF225M0QZC1 329 aaPredicted RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 ARHGEF15O94989 841 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 GYPCP04921 128 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 ALDH2P05091 517 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 TBX2Q13207 712 aaPredicted RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 CUL2Q13617 745 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 TIGD5Q53EQ6 642 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 SPOUT1Q5T280 376 aaKnown RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 COLGALT1Q8NBJ5 622 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 LRCH3Q96II8 777 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 BCO2Q9BYV7 579 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 SMYD3Q9H7B4 428 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 UBE2TQ9NPD8 197 aaPredicted RBP15.22■□□□□ 0.03
RNF4-208ENST00000507247 NLRC4Q9NPP4 1024 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 GDAP2Q9NXN4 497 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
RNF4-208ENST00000507247 LAG3P18627 525 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 TNNC1P63316 161 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 GCNT1Q02742 428 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 FIGNQ5HY92 759 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 UBR7Q8N806 425 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 BAP1Q92560 729 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 SENP8Q96LD8 212 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 ZNF558Q96NG5 402 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 NUP58Q9BVL2 599 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 COLEC11Q9BWP8 271 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 GPR88Q9GZN0 384 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 CEP72Q9P209 647 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 FBXL5Q9UKA1 691 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 ADAM28Q9UKQ2 775 aa15.21■□□□□ 0.03
RNF4-208ENST00000507247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
RNF4-208ENST00000507247 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 CYB561D2O14569 222 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 WEE2P0C1S8 567 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 PNMA6AP0CW24 399 aaPredicted RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 RFX1P22670 979 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 CASP14P31944 242 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 PBX2P40425 430 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 CDH8P55286 799 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 JAM2P57087 298 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms