RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ANKRD35Q8N283 1001 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 GJA10Q969M2 543 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 TEPSINQ96N21 525 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
HERC4-213ENST00000506515 BTBD1Q9H0C5 482 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 SACM1LQ9NTJ5 587 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 SRRDQ9UH36 339 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 DAAM1Q9Y4D1 1078 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 WIZO95785 1651 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 ZNF608Q9ULD9 1512 aaPredicted RBP7.28□□□□□ -1.24
HERC4-213ENST00000506515 TPD52L2O43399 206 aaKnown RBP7.28□□□□□ -1.24
HERC4-213ENST00000506515 EN2P19622 333 aaPredicted RBP7.28□□□□□ -1.24
HERC4-213ENST00000506515 SERPINB3P29508 390 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 DRICH1Q6PGQ1 229 aaPredicted RBP7.28□□□□□ -1.24
HERC4-213ENST00000506515 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 SKAP1Q86WV1 359 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 PDSS2Q86YH6 399 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 SYT12Q8IV01 421 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 FAM186BQ8IYM0 893 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 ZNF808Q8N4W9 903 aaPredicted RBP7.28□□□□□ -1.24
HERC4-213ENST00000506515 SLC17A8Q8NDX2 589 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 TMIEQ8NEW7 156 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 OR6B3Q8NGW1 331 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 KBTBD7Q8WVZ9 684 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 SUCLG2Q96I99 432 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 CCDC138Q96M89 665 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 TRIM54Q9BYV2 358 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 IMPG2Q9BZV3 1241 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 NLRC4Q9NPP4 1024 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 RLIMQ9NVW2 624 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 STK32BQ9NY57 414 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 FNIP2Q9P278 1114 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
HERC4-213ENST00000506515 PATE3B3GLJ2 98 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 BTN3A1O00481 513 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 TBC1D4O60343 1298 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 LDHAP00338 332 aaKnown RBP7.27□□□□□ -1.25
HERC4-213ENST00000506515 ACO1P21399 889 aaKnown RBP7.27□□□□□ -1.25
HERC4-213ENST00000506515 ZNF135P52742 658 aaPredicted RBP7.27□□□□□ -1.25
HERC4-213ENST00000506515 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
HERC4-213ENST00000506515 CRB2Q5IJ48 1285 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 C3orf38Q5JPI3 329 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 METTL24Q5JXM2 366 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 ZNF783Q6ZMS7 281 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 Q8TCH9 128 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 MED16Q9Y2X0 877 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
HERC4-213ENST00000506515 ZNF623O75123 536 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 UNC5CO95185 931 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 RPL17P18621 184 aaKnown RBP7.26□□□□□ -1.25
HERC4-213ENST00000506515 HIBADHP31937 336 aaKnown RBP7.26□□□□□ -1.25
HERC4-213ENST00000506515 TM4SF4P48230 202 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 ARFIP2P53365 341 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 RABGGTBP53611 331 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 SLC13A2Q13183 592 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 DCAF17Q5H9S7 520 aaPredicted RBP7.26□□□□□ -1.25
HERC4-213ENST00000506515 NOMO2Q5JPE7 1267 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 C1QL3Q5VWW1 255 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 SPOCD1Q6ZMY3 1216 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 Q6ZRM9 215 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 LIX1LQ8IVB5 337 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 KLHL32Q96NJ5 620 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 MNTQ99583 582 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 GPR87Q9BY21 358 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 TAGLN3Q9UI15 199 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 AGAP1Q9UPQ3 857 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 PRDM2Q13029 1718 aa7.26□□□□□ -1.25
HERC4-213ENST00000506515 AQRO60306 1485 aaKnown RBP eCLIP7.25□□□□□ -1.25
HERC4-213ENST00000506515 M0QYG6 137 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 LEFTY2O00292 366 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 ABHD16AO95870 558 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 ANXA1P04083 346 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 ITGB3P05106 788 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 CKBP12277 381 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 HTR3AP46098 478 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 CASP5P51878 434 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 NHLH2Q02577 135 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 ICAM4Q14773 271 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
HERC4-213ENST00000506515 XRRA1Q6P2D8 792 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 Q6ZSN1 163 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 USP37Q86T82 979 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 SPICE1Q8N0Z3 855 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 ACRBPQ8NEB7 543 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 SCAMP4Q969E2 229 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 FAM89AQ96GI7 184 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 RIPOR3Q96MK2 946 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 RBM15Q96T37 977 aaKnown RBP eCLIP7.25□□□□□ -1.25
HERC4-213ENST00000506515 BDH2Q9BUT1 245 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 TLR10Q9BXR5 811 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 TINAGL1Q9GZM7 467 aaPredicted RBP7.25□□□□□ -1.25
HERC4-213ENST00000506515 GPR35Q9HC97 309 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 PNPLA8Q9NP80 782 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 AFF4Q9UHB7 1163 aaKnown RBP7.25□□□□□ -1.25
HERC4-213ENST00000506515 DMTF1Q9Y222 760 aa7.25□□□□□ -1.25
HERC4-213ENST00000506515 TOP2AP11388 1531 aaKnown RBP7.25□□□□□ -1.25
HERC4-213ENST00000506515 WDR97A6NE52 1622 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms