RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NBR1Q14596 966 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 ARL6IP4Q66PJ3 421 aaKnown RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 MFSD6LQ8IWD5 586 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 DAW1Q8N136 415 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 SYT2Q8N9I0 419 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 RASSF8Q8NHQ8 419 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 ZSCAN18Q8TBC5 510 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 C18orf25Q96B23 403 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 CALML4Q96GE6 196 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 GCNAQ96QF7 691 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 C8orf33Q9H7E9 229 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 TRPV4Q9HBA0 871 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 ZNF334Q9HCZ1 680 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 DLL3Q9NYJ7 618 aa22.89■■□□□ 1.25
SQSTM1-210ENST00000506042 HNRNPDLO14979 420 aaKnown RBP22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 MAPTP10636 758 aaKnown RBP22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 ODC1P11926 461 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 EPHA5P54756 1037 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 VEPH1Q14D04 833 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 PTPAQ15257 358 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 CELF5Q8N6W0 485 aaKnown RBP22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 TMEM161BQ8NDZ6 487 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 BEST2Q8NFU1 509 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 AK8Q96MA6 479 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 PLA2G2FQ9BZM2 168 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 RPF1Q9H9Y2 349 aaKnown RBP22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 ZMYM5Q9UJ78 669 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 USP18Q9UMW8 372 aa22.88■■□□□ 1.25
SQSTM1-210ENST00000506042 GVINP1Q7Z2Y8 2422 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 SFI1A8K8P3 1242 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 M0QZQ0 153 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 LILRB5O75023 590 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 OAZ2O95190 189 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 SEC24AO95486 1093 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 KRT18P05783 430 aaKnown RBP22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 LRPAP1P30533 357 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 KPNA1P52294 538 aaPredicted RBP22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 RAD51AP2Q09MP3 1159 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 MTAPQ13126 283 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 MYBPC2Q14324 1141 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 TAF12Q16514 161 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 RSPO4Q2I0M5 234 aaPredicted RBP22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 SLC10A6Q3KNW5 377 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 HYIQ5T013 277 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 TAS1R3Q7RTX0 852 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 DCLK2Q8N568 766 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 HSFX1Q9UBD0 423 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 DSEQ9UL01 958 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 YIPF1Q9Y548 306 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 NOTCH4Q99466 2003 aa22.87■■□□□ 1.25
SQSTM1-210ENST00000506042 PDCD11Q14690 1871 aaKnown RBP22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 BMP15O95972 392 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 CXCL8P10145 99 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 FCARP24071 287 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 CNR2P34972 360 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 ATP2C1P98194 919 aaPredicted RBP22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 MAPK7Q13164 816 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 GPR17Q13304 367 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 LAIR1Q6GTX8 287 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 OVOS1Q6IE37 1185 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 VITQ6UXI7 678 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 RNF19BQ6ZMZ0 732 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 METTL23Q86XA0 190 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 TCEAL4Q96EI5 215 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 LMAN1LQ9HAT1 526 aa22.86■■□□□ 1.25
SQSTM1-210ENST00000506042 CACNA1IQ9P0X4 2223 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 VWA3AA6NCI4 1184 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 PP2D1A8MPX8 630 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 OGTO15294 1046 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 CHADO15335 359 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 FAM13AO94988 1023 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 PLA2G4BP0C869 781 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 TYMPP19971 482 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 UBA7P41226 1012 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 CXCL12P48061 93 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 TOB1P50616 345 aaPredicted RBP22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 DGKKQ5KSL6 1271 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 MAP4K3Q8IVH8 894 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 NELL1Q92832 810 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 EXOC4Q96A65 974 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 ZBTB45Q96K62 511 aaPredicted RBP22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 THG1LQ9NWX6 298 aaKnown RBP22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 CEP72Q9P209 647 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 TUBGCP4Q9UGJ1 667 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 MYO15AQ9UKN7 3530 aa22.85■■□□□ 1.25
SQSTM1-210ENST00000506042 TTC26A0AVF1 554 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 HEPACAM2A8MVW5 462 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 ABLIM1O14639 778 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 LRP3O75074 770 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 TBCAO75347 108 aaKnown RBP22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 CDC25AP30304 524 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 TUFMP49411 452 aaKnown RBP22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 NCKAP1LP55160 1127 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 PLCB2Q00722 1185 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 SMARCB1Q12824 385 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 TEAD2Q15562 447 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 ARHGAP29Q52LW3 1261 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 THEM5Q8N1Q8 247 aa22.84■■□□□ 1.25
SQSTM1-210ENST00000506042 RTKNQ9BST9 563 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms