RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZNF764Q96H86 408 aaPredicted RBP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 RAX2Q96IS3 184 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 ACAP3Q96P50 834 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 PRAM1Q96QH2 718 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 QRSL1Q9H0R6 528 aaKnown RBP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 BCO1Q9HAY6 547 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 KLHL11Q9NVR0 708 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 NSD2O96028 1365 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 INSRP06213 1382 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 XRN1Q8IZH2 1706 aaKnown RBP6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 METP08581 1390 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 ANKRD36BQ8N2N9 1353 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 ULK1O75385 1050 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 EYA4O95677 639 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 MGAT1P26572 445 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 GUCY1A2P33402 732 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 PTPN7P35236 360 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 PTH2RP49190 550 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 CLRN1P58418 232 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 GUCY1B3Q02153 619 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 PDZD4Q76G19 769 aaPredicted RBP6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 RHOT2Q8IXI1 618 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 AFAP1L2Q8N4X5 818 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 OR56A1Q8NGH5 318 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 STK26Q9P289 416 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 SLC23A1Q9UHI7 598 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 SIK3Q9Y2K2 1263 aa6.37□□□□□ -1.39
DEPDC1B-203ENST00000505017 ATP7BP35670 1465 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 FPR1P21462 350 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 MPLP40238 635 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 SLC6A9P48067 706 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 SCAND1P57086 179 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 HNRNPA0Q13151 305 aaKnown RBP6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 SEPT2Q15019 361 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 AFMIDQ63HM1 303 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 ADGRG3Q86Y34 549 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 LCORLQ8N3X6 602 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 FAM98AQ8NCA5 519 aaKnown RBP6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 STON2Q8WXE9 905 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 PHACTR3Q96KR7 559 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 COQ10AQ96MF6 247 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 ZSWIM1Q9BR11 485 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 IFT122Q9HBG6 1241 aa6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 APOBEC2Q9Y235 224 aaKnown RBP6.36□□□□□ -1.39
DEPDC1B-203ENST00000505017 CGNL1Q0VF96 1302 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 CHD2O14647 1828 aaKnown RBP6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 PHF2O75151 1096 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 GPR3P46089 330 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 OCA2Q04671 838 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 CCDC142Q17RM4 750 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 GPR149Q86SP6 731 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 AUTS2Q8WXX7 1259 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 MYOCQ99972 504 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 LDAHQ9H6V9 325 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 TERF2IPQ9NYB0 399 aa6.35□□□□□ -1.39
DEPDC1B-203ENST00000505017 ARHGEF17Q96PE2 2063 aaPredicted RBP6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 SLC6A2P23975 617 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 PCSK1P29120 753 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 ALDH1A3P47895 512 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 MASP1P48740 699 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 USP14P54578 494 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 RAP2BP61225 183 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 SRSF2Q01130 221 aaKnown RBP6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 STAT4Q14765 748 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 PRR16Q569H4 304 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 TOR2AQ5JU69 321 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 ABHD17BQ5VST6 288 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 MED25Q71SY5 747 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 MAPKAPK5Q8IW41 473 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 TMEM132CQ8N3T6 1108 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 FUBP1Q96AE4 644 aaKnown RBP6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 NACC2Q96BF6 587 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 CDK19Q9BWU1 502 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 GREM2Q9H772 168 aa6.34□□□□□ -1.39
DEPDC1B-203ENST00000505017 NPHP4O75161 1426 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 PTPRUQ92729 1446 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 ANKRD26Q9UPS8 1709 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 POU3F3P20264 500 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 MCAMP43121 646 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SP140Q13342 867 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 TSHZ3Q63HK5 1081 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 PQLC1Q8N2U9 271 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SUPT20HQ8NEM7 779 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 FAM126AQ9BYI3 521 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 CAAP1Q9H8G2 361 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms