RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SQORQ9Y6N5 450 aa10.06□□□□□ -0.8
TPM3-218ENST00000505010 USP34Q70CQ2 3546 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 ESPNB1AK53 854 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 F8VZ95 297 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM3-218ENST00000505010 GFPT2O94808 682 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 KRT19P08727 400 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 PNMA6AP0CW24 399 aaPredicted RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 ITGA4P13612 1032 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 FECHP22830 423 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 STAT1P42224 750 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 RAB27AP51159 221 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 MBTPS1Q14703 1052 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 MTF1Q14872 753 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 MEA1Q16626 185 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 ZNF699Q32M78 642 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 SPOPLQ6IQ16 392 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 WDR59Q6PJI9 974 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 C17orf53Q8N3J3 647 aaPredicted RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 RNF169Q8NCN4 708 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 SYN2Q92777 582 aaPredicted RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 KAT5Q92993 513 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 DESI2Q9BSY9 194 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 STK33Q9BYT3 514 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 UBE2ZQ9H832 354 aaPredicted RBP10.05□□□□□ -0.8
TPM3-218ENST00000505010 PLEKHA5Q9HAU0 1116 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 C2CD2Q9Y426 696 aa10.05□□□□□ -0.8
TPM3-218ENST00000505010 SCN1AP35498 2009 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 BRWD1Q9NSI6 2320 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 MGEA5O60502 916 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 LPXNO60711 386 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 ITGB3P05106 788 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 SERPING1P05155 500 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 FERP16591 822 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 POLR2BP30876 1174 aaKnown RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 HNRNPH3P31942 346 aaKnown RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 RFC2P35250 354 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 SOX5P35711 763 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 USP8P40818 1118 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 GUCY2FP51841 1108 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 MFAP3P55082 362 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 MYL6P60660 151 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 DSC3Q14574 896 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 LEXMQ3ZCV2 418 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 RAD9BQ6WBX8 426 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 TOGARAM2Q6ZUX3 1019 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 TMEM130Q8N3G9 435 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 KIAA1524Q8TCG1 905 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 HELQQ8TDG4 1101 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 LPPQ93052 612 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 TATDN2Q93075 761 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 KREMEN1Q96MU8 473 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 CHP1Q99653 195 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 ADAM2Q99965 735 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 IFIH1Q9BYX4 1025 aaKnown RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 CXCL16Q9H2A7 254 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 DPP3Q9NY33 737 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 TUBGCP4Q9UGJ1 667 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 PLAGL2Q9UPG8 496 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 DERAQ9Y315 318 aa10.04□□□□□ -0.8
TPM3-218ENST00000505010 R3HCC1Q9Y3T6 440 aaKnown RBP10.04□□□□□ -0.8
TPM3-218ENST00000505010 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 DCXO43602 365 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ASS1P00966 412 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 KRT5P13647 590 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 KCNA5P22460 613 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 MLH1P40692 756 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 KCNJ6P48051 423 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 CDK17Q00537 523 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 GCNT1Q02742 428 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 KLHL30Q0D2K2 578 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 CUL2Q13617 745 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 SGSM1Q2NKQ1 1148 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 SCARA3Q6AZY7 606 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 SCARA5Q6ZMJ2 495 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ENOSF1Q7L5Y1 443 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 BEST2Q8NFU1 509 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 FAM81BQ96LP2 452 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms