RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FAM20AQ96MK3 541 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 UROC1Q96N76 676 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 PAAF1Q9BRP4 392 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 TRIM6Q9C030 488 aaPredicted RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 DUSP15Q9H1R2 295 aaPredicted RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 EVLQ9UI08 416 aaPredicted RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 ZMYM5Q9UJ78 669 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 HES2Q9Y543 173 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 NID2Q14112 1375 aa6.65□□□□□ -1.35
GYPB-204ENST00000504951 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 TMEM150BA6NC51 233 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 C4orf47A7E2U8 309 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 HEPACAM2A8MVW5 462 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 SPECC1L-ADORA2AF8WAN1 911 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 WNT7AO00755 349 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 CDX4O14627 284 aaPredicted RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 PTGESO14684 152 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TRDMT1O14717 391 aaKnown RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 SYN3O14994 580 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TBX3O15119 743 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 WIPF1O43516 503 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 CAVIN2O95810 425 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 LRG1P02750 347 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 XRCC6P12956 609 aaKnown RBP eCLIP6.64□□□□□ -1.35
GYPB-204ENST00000504951 ELF1P32519 619 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 CCR2P41597 374 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 GCGRP47871 477 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 NPEPPSP55786 919 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 HNRNPDQ14103 355 aaKnown RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 GRM2Q14416 872 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 PTPAQ15257 358 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 EPHA7Q15375 998 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 ELF2Q15723 593 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 XKR4Q5GH76 650 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TMEM196Q5HYL7 178 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 SPDYCQ5MJ68 293 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 GALNT17Q6IS24 598 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 PIP4P1Q86T03 277 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 CCDC148Q8NFR7 591 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 BEST2Q8NFU1 509 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 SNIP1Q8TAD8 396 aaKnown RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 ING5Q8WYH8 240 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TMEM143Q96AN5 459 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TCEAL4Q96EI5 215 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 ZNF512Q96ME7 567 aaPredicted RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 ZSWIM3Q96MP5 696 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 LRRC3Q9BY71 257 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 FZD8Q9H461 694 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 NXF3Q9H4D5 531 aaKnown RBP6.64□□□□□ -1.35
GYPB-204ENST00000504951 KCNMB3Q9NPA1 279 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 TMEM9BQ9NQ34 198 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 DKK4Q9UBT3 224 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 SLC27A5Q9Y2P5 690 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 CDY1Q9Y6F8 540 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 VWA8A3KMH1 1905 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 ADAMTS20P59510 1910 aa6.64□□□□□ -1.35
GYPB-204ENST00000504951 LNP1A1A4G5 178 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 H7C4K7 107 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 M0R2N6 131 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 GIPC1O14908 333 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 FGF19O95750 216 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 AKAP5P24588 427 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 YWHABP31946 246 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 RDXP35241 583 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 DPP6P42658 865 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 AMPD2Q01433 879 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 ROR1Q01973 937 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 EMC2Q15006 297 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 NTRK3Q16288 839 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 UPP1Q16831 310 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 FBXO43Q4G163 708 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 BMP2KLQ5H9B9 411 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 IQCEQ6IPM2 695 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 TXNDC11Q6PKC3 985 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 BRICD5Q6PL45 260 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 CEP57Q86XR8 500 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 ELMOD1Q8N336 334 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 LSM14AQ8ND56 463 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 CCDC26Q8TAB7 109 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 ZSCAN18Q8TBC5 510 aaPredicted RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 CPB2Q96IY4 423 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 PPP1R10Q96QC0 940 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 TMEM209Q96SK2 561 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 CORO1BQ9BR76 489 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 EDEM2Q9BV94 578 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 REPIN1Q9BWE0 567 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 RNF26Q9BY78 433 aaPredicted RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 SLC32A1Q9H598 525 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 ZSWIM4Q9H7M6 989 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 RTN4Q9NQC3 1192 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 XPNPEP1Q9NQW7 623 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 ANKEF1Q9NU02 776 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 PRMT7Q9NVM4 692 aaPredicted RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 C2orf42Q9NWW7 574 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms