RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TOPORSQ9NS56 1045 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 RXFP3Q9NSD7 469 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 CEP72Q9P209 647 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 YIPF1Q9Y548 306 aa7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 KMT2BQ9UMN6 2715 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-203ENST00000504841 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 ARNTLO00327 626 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 DPYSL4O14531 572 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 SYN3O14994 580 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 FOXD2O60548 495 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 MICAL2O94851 1124 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 OR4Q2P0C623 313 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 CCDC192P0DO97 292 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 XRCC6P12956 609 aaKnown RBP eCLIP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 CYP11B2P19099 503 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 CNR2P34972 360 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 GRM5P41594 1212 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 COL9A2Q14055 689 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 PON2Q15165 354 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 STPG1Q5TH74 334 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 RNF19BQ6ZMZ0 732 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 LEMD2Q8NC56 503 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 WASF1Q92558 559 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 C18orf25Q96B23 403 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 ZMAT2Q96NC0 199 aaKnown RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 TCHPQ9BT92 498 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 C8orf33Q9H7E9 229 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 TRPV5Q9NQA5 729 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 SLC38A7Q9NVC3 462 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 PDCD11Q14690 1871 aaKnown RBP7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
NPIPB3-203ENST00000504841 CCDC169A6NNP5 214 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 BTBD18B2RXH4 712 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 K7ERI5 159 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 CHADO15335 359 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 EXTL3O43909 919 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 RPP40O75818 363 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 CTDNEP1O95476 244 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 MARCKSP29966 332 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 NOVA1P51513 510 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 CDR1P51861 262 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 EFNA5P52803 228 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SPAG1Q07617 926 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TNK2Q07912 1038 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 DGKKQ5KSL6 1271 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TPGS2Q68CL5 300 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TCEAL6Q6IPX3 200 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 PSAPL1Q6NUJ1 521 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 PKN3Q6P5Z2 889 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 C1orf228Q6PIY5 440 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 HAUS6Q7Z4H7 955 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 KBTBD6Q86V97 674 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 WDR5BQ86VZ2 330 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 ARID3BQ8IVW6 561 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 DIS3L2Q8IYB7 885 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TMEM130Q8N3G9 435 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 NECAB1Q8N987 351 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SPRYD3Q8NCJ5 442 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 APPL2Q8NEU8 664 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 DDX12PQ92771 950 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TCEAL3Q969E4 200 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 MSANTD3Q96H12 275 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TARS2Q9BW92 718 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TRPV4Q9HBA0 871 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SH2B1Q9NRF2 756 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 ANKFY1Q9P2R3 1169 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TPCN1Q9ULQ1 816 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TNFSF13BQ9Y275 285 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 TIMM13Q9Y5L4 95 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 SDK1Q7Z5N4 2213 aa7.54□□□□□ -1.2
NPIPB3-203ENST00000504841 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 MYBPHLA2RUH7 354 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SOAT2O75908 522 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 EPN2O95208 641 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 KCNK5O95279 499 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 PAPSS2O95340 614 aaPredicted RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 PROS1P07225 676 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 OR52Z1P0C646 297 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 ZNF806P0C7X5 589 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 HOXB3P14651 431 aaPredicted RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SPINK2P20155 84 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 CCT6AP40227 531 aaKnown RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 MPLP40238 635 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 ALDH1A3P47895 512 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 LIMK1P53667 647 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 EPHB3P54753 998 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms