RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RGS9BPQ6ZS82 235 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 PTF1AQ7RTS3 328 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
LINC02397-201ENST00000504409 FCGR1BQ92637 280 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 SH3KBP1Q96B97 665 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 ATF6P18850 670 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 USP11P51784 963 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 PLTPP55058 493 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 SESN2P58004 480 aaPredicted RBP6.37□□□□□ -1.39
LINC02397-201ENST00000504409 TMED2Q15363 201 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 ANKRD13BQ86YJ7 626 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 ERI1Q8IV48 349 aaKnown RBP6.37□□□□□ -1.39
LINC02397-201ENST00000504409 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
LINC02397-201ENST00000504409 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 DESI2Q9BSY9 194 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 OR2B2Q9GZK3 357 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 NLRC4Q9NPP4 1024 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 DYRK4Q9NR20 520 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 RHBDL2Q9NX52 303 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 DENND2AQ9ULE3 1009 aa6.37□□□□□ -1.39
LINC02397-201ENST00000504409 BARX2Q9UMQ3 279 aaPredicted RBP6.37□□□□□ -1.39
LINC02397-201ENST00000504409 PTPREP23469 700 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 C1DQ13901 141 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MTX3Q5HYI7 312 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 RABGAP1LQ5R372 815 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 STOX1Q6ZVD7 989 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 VPS11Q9H270 941 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 DHX33Q9H6R0 707 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PTTG3PQ9NZH4 202 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 IFT172Q9UG01 1749 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SLC12A4Q9UP95 1085 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 GLI2P10070 1586 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TMCC2O75069 709 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TPPPO94811 219 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PIK3CBP42338 1070 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 S100A12P80511 92 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TTC39BQ5VTQ0 682 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SMYD4Q8IYR2 804 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 CHPFQ8IZ52 775 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FAR1Q8WVX9 515 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MAML1Q92585 1016 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FUCA2Q9BTY2 467 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TRIM10Q9UDY6 481 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MROH1Q8NDA8 1641 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TCP11X1B4DZS4 312 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 LZTS3O60299 673 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ALBP02768 609 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ERMARDQ5T6L9 678 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ANGPTL8Q6UXH0 198 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 LCORLQ8N3X6 602 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 STOX2Q9P2F5 926 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PEX1O43933 1283 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TALDO1P37837 337 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 EPC2Q52LR7 807 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 C2CD6Q53TS8 623 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 GRID1Q9ULK0 1009 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PCDHA12Q9UN75 941 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MYH7BA7E2Y1 1941 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TEX51A0A1B0GUA7 166 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 NBPF26B4DH59 902 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 E7EWF7 191 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 LOC110117498-PIK3R3F6TDL0 507 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FGGP02679 453 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FGFR3P22607 806 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PTDSS1P48651 473 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 COG2Q14746 738 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 KIAA0408Q6ZU52 694 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PIK3R3Q92569 461 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FNBP1Q96RU3 617 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TMEM245Q9H330 911 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MRPL39Q9NYK5 338 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 LRWD1Q9UFC0 647 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PCDHA5Q9Y5H7 936 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PREX1Q8TCU6 1659 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SNX2O60749 519 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PLS3P13797 630 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 CPA1P15085 419 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ATF7P17544 494 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SRBD1Q8N5C6 995 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SNX19Q92543 992 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ERP27Q96DN0 273 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PRMT1Q99873 361 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 CARD14Q9BXL6 1004 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 UBP1Q9NZI7 540 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PEPDP12955 493 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 TRIP13Q15645 432 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 STARD8Q92502 1023 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PNPLA8Q9NP80 782 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ARMC1Q9NVT9 282 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 ADCY7P51828 1080 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 BNIP2Q12982 314 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FAM172AQ8WUF8 416 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 NR2E3Q9Y5X4 410 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PPLO60437 1756 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 GSTA4O15217 222 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms