RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DSG1Q02413 1049 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 PSMD5Q16401 504 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 PCSK7Q16549 785 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 HIF1AQ16665 826 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 ZNF528Q3MIS6 628 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 PPM1LQ5SGD2 360 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 ZBTB41Q5SVQ8 909 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 UBXN11Q5T124 520 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 LAIR1Q6GTX8 287 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 OGFOD2Q6N063 350 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 COLGALT2Q8IYK4 626 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 POU5F2Q8N7G0 328 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 C12orf50Q8NA57 414 aaPredicted RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 IGDCC4Q8TDY8 1250 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 ZCCHC14Q8WYQ9 949 aaKnown RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 TNPO1Q92973 898 aaKnown RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 COL26A1Q96A83 441 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 TMEM143Q96AN5 459 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 TCEAL4Q96EI5 215 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 SHDQ96IW2 340 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 FAM167AQ96KS9 214 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 DDX23Q9BUQ8 820 aaKnown RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 CXCL16Q9H2A7 254 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 ARRDC1-AS1Q9H2J1 176 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 RIC8AQ9NPQ8 531 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 POLR3BQ9NW08 1133 aaPredicted RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 MIOSQ9NXC5 875 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 ZDHHC7Q9NXF8 308 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 SUCLA2Q9P2R7 463 aaPredicted RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 ADGRE2Q9UHX3 823 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 FBXW11Q9UKB1 542 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 CEP131Q9UPN4 1083 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 IPPQ9Y573 584 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 PCDHGA11Q9Y5H2 935 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 MAFBQ9Y5Q3 323 aaPredicted RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 RBM8AQ9Y5S9 174 aaKnown RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 PDCD11Q14690 1871 aaKnown RBP4.06□□□□□ -1.76
USP46-205ENST00000504078 ACACBO00763 2458 aa4.06□□□□□ -1.76
USP46-205ENST00000504078 VWA8A3KMH1 1905 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SMCO2A6NFE2 343 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 ARL5CA6NH57 179 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SLC38A8A6NNN8 435 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 GOLGA8AA7E2F4 631 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 GOLGA8BA8MQT2 603 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 WDR64B1ANS9 1081 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 MEIS1O00470 390 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 MAGEB2O15479 319 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 B4GALT5O43286 388 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 LZTS3O60299 673 aaPredicted RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 TBC1D4O60343 1298 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 GAS7O60861 476 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 DTNBO60941 627 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 NPTXRO95502 500 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 TDP2O95551 362 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 PROS1P07225 676 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 RETP07949 1114 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SRGAP2CP0DJJ0 459 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 ITGA4P13612 1032 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 FCARP24071 287 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 CCNE1P24864 410 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 GDI1P31150 447 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 RAB27AP51159 221 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 NPEPPSP55786 919 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 PSMA6P60900 246 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 SETQ01105 290 aaPredicted RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 PRKCQQ04759 706 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 TYRO3Q06418 890 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 RING1Q06587 406 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 CSRP2Q16527 193 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 RTN1Q16799 776 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 UVSSAQ2YD98 709 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 PABPC1LQ4VXU2 614 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 GLRA4Q5JXX5 417 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 STPG1Q5TH74 334 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 LRCH2Q5VUJ6 765 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 TANGO2Q6ICL3 276 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 ZNF746Q6NUN9 644 aaPredicted RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 PKN3Q6P5Z2 889 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 ELMSAN1Q6PJG2 1045 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 C19orf48Q6RUI8 117 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 MTSS1LQ765P7 747 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 MIER3Q7Z3K6 550 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 KBTBD6Q86V97 674 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 CHD1LQ86WJ1 897 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 DTX1Q86Y01 620 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 RNF168Q8IYW5 571 aaPredicted RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 TMEM130Q8N3G9 435 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP46-205ENST00000504078 SMG8Q8ND04 991 aaKnown RBP4.05□□□□□ -1.76
USP46-205ENST00000504078 LENG9Q96B70 501 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 HSH2DQ96JZ2 352 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 TMEM175Q9BSA9 504 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 EDEM2Q9BV94 578 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 CHRDQ9H2X0 955 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 BRD9Q9H8M2 597 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 AKTIPQ9H8T0 292 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 CHST12Q9NRB3 414 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 DISC1Q9NRI5 854 aa4.05□□□□□ -1.76
USP46-205ENST00000504078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms