RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 IGFBP6P24592 240 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CDC25AP30304 524 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CCR3P51677 355 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC12A3P55017 1021 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 NCKAP1LP55160 1127 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 ATP2C1P98194 919 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 LMNB2Q03252 620 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 YWHAHQ04917 246 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 UBXN2BQ14CS0 331 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CTXN3Q4LDR2 81 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 FAM78AQ5JUQ0 283 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TPRG1Q6ZUI0 275 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 KIAA2013Q8IYS2 634 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 FAM184AQ8NB25 1140 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 C2orf15Q8WU43 125 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 KXD1Q9BQD3 176 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 RTKNQ9BST9 563 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TCHPQ9BT92 498 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MMTAG2Q9BU76 263 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TARS2Q9BW92 718 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 LRRC3Q9BY71 257 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 PLA2G2FQ9BZM2 168 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 ST6GALNAC4Q9H4F1 302 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 C8orf33Q9H7E9 229 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 BRD9Q9H8M2 597 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CYP4F11Q9HBI6 524 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 GOLGA2P5Q9HBQ8 144 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 ASAH2Q9NR71 780 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CEP72Q9P209 647 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 DERAQ9Y315 318 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MTF2Q9Y483 593 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 F5P12259 2224 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 OBSL1O75147 1896 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TCHHQ07283 1943 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 GREB1Q4ZG55 1949 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 COL4A3Q01955 1670 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 LRRN2O75325 713 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 SEC24AO95486 1093 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CYP11A1P05108 521 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CHRNB1P11230 501 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CEBPBP17676 345 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 MARCKSP29966 332 aaPredicted RBP6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 MCM4P33991 863 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CCR2P41597 374 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF131P52739 623 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 PLCB2Q00722 1185 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CSTF1Q05048 431 aaKnown RBP6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 MTAPQ13126 283 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 LRRC32Q14392 662 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 IL17AQ16552 155 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 DGKKQ5KSL6 1271 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 SPATA1Q5VX52 437 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 LAIR1Q6GTX8 287 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 VITQ6UXI7 678 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 RALGPS2Q86X27 583 aaPredicted RBP6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 NT5DC4Q86YG4 428 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 TMC8Q8IU68 726 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CCDC83Q8IWF9 413 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 SPEM1Q8N4L4 309 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 FAM3CQ92520 227 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 PSMG2Q969U7 264 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 MCRS1Q96EZ8 462 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 TBC1D32Q96NH3 1257 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 KIF2CQ99661 725 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CORO1BQ9BR76 489 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 CCSER1Q9C0I3 900 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 ASB7Q9H672 318 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 HEBP1Q9NRV9 189 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 DSEQ9UL01 958 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 SMG5Q9UPR3 1016 aaKnown RBP6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 USP20Q9Y2K6 914 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 C2CD2Q9Y426 696 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 PCDHB6Q9Y5E3 794 aa6.65□□□□□ -1.34
LSM3P4-201ENST00000502948 RALGAPA1Q6GYQ0 2036 aa6.65□□□□□ -1.35
LSM3P4-201ENST00000502948 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 MYBPHLA2RUH7 354 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 I3L4J1 428 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 PIRO00625 290 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF263O14978 683 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 OGTO15294 1046 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 SLC16A4O15374 487 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 DTNBO60941 627 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 VNN2O95498 520 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 BMP15O95972 392 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 NEFLP07196 543 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 RETP07949 1114 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 CPB1P15086 417 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 LIG1P18858 919 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 TUFMP49411 452 aaKnown RBP6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 EPHB3P54753 998 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 LILRA4P59901 499 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 GTF2BQ00403 316 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 GUCY1B3Q02153 619 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 PPP2R3AQ06190 1150 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 TWF1Q12792 350 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM119Q4V9L6 283 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms