RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GIPC1O14908 333 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 CHADO15335 359 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 NEMFO60524 1076 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 FOXD2O60548 495 aaPredicted RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 RPP40O75818 363 aaKnown RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 PROS1P07225 676 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 OR4Q2P0C623 313 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 ZNF806P0C7X5 589 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 SPATA31C1P0DKV0 1188 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 CTHP32929 405 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 MCM4P33991 863 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 NAMPTP43490 491 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 TNK2Q07912 1038 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 SCRN1Q12765 414 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 FOXC1Q12948 553 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 RNF43Q68DV7 783 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 PADI6Q6TGC4 694 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 CATSPER3Q86XQ3 398 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 ZMAT2Q96NC0 199 aaKnown RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 C8orf33Q9H7E9 229 aaPredicted RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 TIMM13Q9Y5L4 95 aaPredicted RBP10□□□□□ -0.81
CCDC171-209ENST00000498725 SDK1Q7Z5N4 2213 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 BAHCC1Q9P281 2608 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 F5P12259 2224 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 MYH11P35749 1972 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 SOAT2O75908 522 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 CDKL5O76039 1030 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 MICAL2O94851 1124 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 EPN2O95208 641 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TOP3BO95985 862 aaKnown RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 MCM7P33993 719 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 NOVA1P51513 510 aaKnown RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 LIMK1P53667 647 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 SHC2P98077 582 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 SEZ6Q53EL9 994 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 DGKKQ5KSL6 1271 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TPGS2Q68CL5 300 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 ZNF280DQ6N043 979 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 UNQ6494/PRO21346Q6UXR6 183 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 ARID3BQ8IVW6 561 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 FAM177A1Q8N128 213 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 GAB3Q8WWW8 586 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 IFT74Q96LB3 600 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 LRRC3BQ96PB8 259 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 CDT1Q9H211 546 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TMEM60Q9H2L4 133 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TRPV4Q9HBA0 871 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TOPORSQ9NS56 1045 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 AFF4Q9UHB7 1163 aaKnown RBP9.99□□□□□ -0.81
CCDC171-209ENST00000498725 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 YIPF1Q9Y548 306 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 MYO16Q9Y6X6 1858 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 NUP205Q92621 2012 aa9.99□□□□□ -0.81
CCDC171-209ENST00000498725 TCHHQ07283 1943 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 DENND4CQ5VZ89 1909 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 MYBPHLA2RUH7 354 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 CCDC169A6NNP5 214 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 K7ERI5 159 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SYN3O14994 580 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 PAPSS2O95340 614 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 CYP11B2P19099 503 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 MARCKSP29966 332 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 MPLP40238 635 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 GRM5P41594 1212 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SPAG1Q07617 926 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 DUSP4Q13115 394 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 MRPL58Q14197 206 aaKnown RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 PPP2R5AQ15172 486 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 GPR158Q5T848 1215 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 DDX12PQ92771 950 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 E2F7Q96AV8 911 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SMG9Q9H0W8 520 aaKnown RBP9.98□□□□□ -0.81
CCDC171-209ENST00000498725 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 TUFT1Q9NNX1 390 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SLC38A7Q9NVC3 462 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 INVSQ9Y283 1065 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 KIAA1549LQ6ZVL6 1849 aa9.98□□□□□ -0.81
CCDC171-209ENST00000498725 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms