RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 A0A1W2PRU2 124 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
CCDC58-207ENST00000498466 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
CCDC58-207ENST00000498466 PEX3P56589 373 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 DGKKQ5KSL6 1271 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 HAUS3Q68CZ6 603 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 GPIHBP1Q8IV16 184 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 C12orf50Q8NA57 414 aaPredicted RBP15.24■□□□□ 0.03
CCDC58-207ENST00000498466 TTC8Q8TAM2 541 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 YIPF1Q9Y548 306 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 F5P12259 2224 aa15.24■□□□□ 0.03
CCDC58-207ENST00000498466 SPECC1L-ADORA2AF8WAN1 911 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 AXIN1O15169 862 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 OR52Z1P0C646 297 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
CCDC58-207ENST00000498466 FCHO2Q0JRZ9 810 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 TXNDC11Q6PKC3 985 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 PGLYRP2Q96PD5 576 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
CCDC58-207ENST00000498466 C2orf42Q9NWW7 574 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
CCDC58-207ENST00000498466 MYBPHLA2RUH7 354 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 DPYSL4O14531 572 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 MCF2P10911 925 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 MUTP22033 750 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 CTHP32929 405 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 NPTX2P47972 431 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 LIMK1P53667 647 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 EPHB3P54753 998 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 YWHAHQ04917 246 aaPredicted RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 DMP1Q13316 513 aaPredicted RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 PLD1Q13393 1074 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 PON2Q15165 354 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 SF3A2Q15428 464 aaKnown RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 ZNF174Q15697 407 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 CCDC6Q16204 474 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 ECM1Q16610 540 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 WDR44Q5JSH3 913 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 STXBP5Q5T5C0 1151 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 HAUS6Q7Z4H7 955 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 WDR5BQ86VZ2 330 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 RALGPS2Q86X27 583 aaPredicted RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 ARID3BQ8IVW6 561 aaPredicted RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
CCDC58-207ENST00000498466 GTF3C6Q969F1 213 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 ZFYVE19Q96K21 471 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 ARRDC1-AS1Q9H2J1 176 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 TMEM134Q9H6X4 195 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 GTSE1Q9NYZ3 720 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 USP24Q9UPU5 2620 aa15.22■□□□□ 0.03
CCDC58-207ENST00000498466 JAK2O60674 1132 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 LARGE1O95461 756 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 OR4Q2P0C623 313 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 PMLP29590 882 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 HOXC13P31276 330 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 DUSP4Q13115 394 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 SAFBQ15424 915 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC58-207ENST00000498466 ME3Q16798 604 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 BEST2Q8NFU1 509 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 LRRC3Q9BY71 257 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 KIAA1024Q9UPX6 916 aa15.21■□□□□ 0.03
CCDC58-207ENST00000498466 TIMM13Q9Y5L4 95 aaPredicted RBP15.21■□□□□ 0.03
CCDC58-207ENST00000498466 MEFVO15553 781 aaPredicted RBP15.2■□□□□ 0.02
CCDC58-207ENST00000498466 PROZP22891 400 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 HOXA6P31267 233 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 GUCY1B3Q02153 619 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 CCINQ13939 588 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 SEZ6Q53EL9 994 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 TAS1R3Q7RTX0 852 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 USP37Q86T82 979 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 SYNPOQ8N3V7 929 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
CCDC58-207ENST00000498466 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 CRISPLD1Q9H336 500 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 ATXN3LQ9H3M9 355 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 RXFP3Q9NSD7 469 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
CCDC58-207ENST00000498466 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 RALYQ9UKM9 306 aaKnown RBP15.2■□□□□ 0.02
CCDC58-207ENST00000498466 FRYQ5TBA9 3013 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 CHD6Q8TD26 2715 aa15.2■□□□□ 0.02
CCDC58-207ENST00000498466 LAMA1P25391 3075 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 TRIP11Q15643 1979 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 ABLIM1O14639 778 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 EXTL3O43909 919 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms