RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 HGSO14964 777 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 CLGNO14967 610 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 TBC1D4O60343 1298 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 ENDOD1O94919 500 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 PRKCBP05771 671 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 CLTBP09497 229 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 ACADMP11310 421 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 NPPBP16860 134 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SCP2P22307 547 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SOX8P57073 446 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 BPIFB3P59826 476 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 AP2B1P63010 937 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SLC13A2Q13183 592 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 WTAPQ15007 396 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 GAB4Q2WGN9 574 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 DNAJC21Q5F1R6 531 aaKnown RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 EMC10Q5UCC4 262 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 FAM180AQ6UWF9 173 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 GADL1Q6ZQY3 521 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 RTL10Q7L3V2 364 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 R3HCC1LQ7Z5L2 792 aaKnown RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 RSPH3Q86UC2 560 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 IQCA1Q86XH1 822 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 FAM90A1Q86YD7 464 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 GLB1L2Q8IW92 636 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SLC44A2Q8IWA5 706 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 RPAP2Q8IXW5 612 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 PLD6Q8N2A8 252 aaKnown RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 TBC1D31Q96DN5 1066 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 TMX3Q96JJ7 454 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 BTBD6Q96KE9 485 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 FCRL2Q96LA5 508 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF518BQ9C0D4 1074 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 MANSC1Q9H8J5 431 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 DIAPH3Q9NSV4 1193 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 PI4KBQ9UBF8 816 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF212Q9UDV6 495 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SRRDQ9UH36 339 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 TMCC3Q9ULS5 477 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 MED16Q9Y2X0 877 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 RRP7AQ9Y3A4 280 aaKnown RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 SNX8Q9Y5X2 465 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 GPRASP1Q5JY77 1395 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 PASKQ96RG2 1323 aa6.77□□□□□ -1.32
BRCA1-224ENST00000497488 WRNQ14191 1432 aaPredicted RBP eCLIP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 A0A087WZ62 844 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 A0A0A6YYJ9 748 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 AP3D1O14617 1153 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 SART1O43290 800 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 NRP2O60462 931 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 COBLO75128 1261 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 IGHDP01880 384 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 AHSGP02765 367 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 ATP6V1B1P15313 513 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 PRDX5P30044 214 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 TNNT3P45378 269 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 CCT4P50991 539 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 RAC1P63000 192 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 INSM1Q01101 510 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 SMC1AQ14683 1233 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 CTXN3Q4LDR2 81 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 MFSD6Q6ZSS7 791 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 TRIM48Q8IWZ4 208 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 CARNMT1Q8N4J0 409 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 OR6Y1Q8NGX8 325 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 GIMAP7Q8NHV1 300 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 CCDC47Q96A33 483 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 RNF125Q96EQ8 232 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 CNDP2Q96KP4 475 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 JAKMIP1Q96N16 626 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 FDXACB1Q9BRP7 624 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 NOL10Q9BSC4 688 aaKnown RBP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 RTKNQ9BST9 563 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 DESI2Q9BSY9 194 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 TBC1D23Q9NUY8 699 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 LPAR3Q9UBY5 353 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 FTSJ1Q9UET6 329 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 RPS6KA6Q9UK32 745 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 PCDHGB4Q9UN71 923 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 PAXBP1Q9Y5B6 917 aa6.77□□□□□ -1.33
BRCA1-224ENST00000497488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-224ENST00000497488 TOP2BQ02880 1626 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 BIVM-ERCC5R4GMW8 1640 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 H0Y3Z8 333 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 GTPBP1O00178 669 aaKnown RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 NFIBO00712 420 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 KCNQ3O43525 872 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms