RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 TMEM265A0A087WTH1 108 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 SPTLC1O15269 473 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 STAU1O95793 577 aaKnown RBP19.72■□□□□ 0.75
TSSC4-210ENST00000496468 CST3P01034 146 aaPredicted RBP19.72■□□□□ 0.75
TSSC4-210ENST00000496468 ODC1P11926 461 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 BRCC3P46736 316 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 TNNC1P63316 161 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 PLCB3Q01970 1234 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 KRT17Q04695 432 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 FILIP1LQ4L180 1135 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 CD300LGQ6UXG3 332 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 DSTYKQ6XUX3 929 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 GBP6Q6ZN66 633 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 ARNTL2Q8WYA1 636 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 TAF4BQ92750 862 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 SEMA4DQ92854 862 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 PI4K2AQ9BTU6 479 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 XYLT2Q9H1B5 865 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.754e-20■■■■■ 484.4
TSSC4-210ENST00000496468 STK39Q9UEW8 545 aa19.72■□□□□ 0.75
TSSC4-210ENST00000496468 ARHGEF37A1IGU5 675 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 GTPBP10A4D1E9 387 aaKnown RBP19.71■□□□□ 0.75
TSSC4-210ENST00000496468 KPNA7A9QM74 516 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 I3L4J1 428 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 SOX1O00570 391 aaPredicted RBP19.71■□□□□ 0.75
TSSC4-210ENST00000496468 ASS1P00966 412 aaKnown RBP19.71■□□□□ 0.75
TSSC4-210ENST00000496468 IGFBP6P24592 240 aaPredicted RBP19.71■□□□□ 0.75
TSSC4-210ENST00000496468 FANCCQ00597 558 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 EXOC3L4Q17RC7 722 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 SGSM1Q2NKQ1 1148 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 TIGD5Q53EQ6 642 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 ZNF667Q5HYK9 610 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 WDR44Q5JSH3 913 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 SUSD3Q96L08 255 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 HERC2P3Q9BVR0 1158 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 INTS2Q9H0H0 1204 aaKnown RBP19.71■□□□□ 0.75
TSSC4-210ENST00000496468 VRTNQ9H8Y1 702 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 SNX9Q9Y5X1 595 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 CHD9Q3L8U1 2897 aa19.71■□□□□ 0.75
TSSC4-210ENST00000496468 LRRC10BA6NIK2 292 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 P4HA1P13674 534 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 SPOPLQ6IQ16 392 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 SCARA5Q6ZMJ2 495 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.7■□□□□ 0.74
TSSC4-210ENST00000496468 DDX53Q86TM3 631 aaKnown RBP19.7■□□□□ 0.74
TSSC4-210ENST00000496468 GDPD5Q8WTR4 605 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 SENP8Q96LD8 212 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 CRACR2AQ9BSW2 395 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 VN1R3Q9BXE9 311 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 GPR62Q9BZJ7 368 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 NIF3L1Q9GZT8 377 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 ZNF576Q9H609 170 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 NXF1Q9UBU9 619 aaKnown RBP19.7■□□□□ 0.74
TSSC4-210ENST00000496468 PCDHB8Q9UN66 801 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 LZTS1Q9Y250 596 aa19.7■□□□□ 0.74
TSSC4-210ENST00000496468 CHD7Q9P2D1 2997 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 VWA8A3KMH1 1905 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 A0A1B0GTH6 734 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 M0QZQ0 153 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 SOD2P04179 222 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 UBXN1Q04323 297 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 UBE3AQ05086 875 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 GPM6BQ13491 265 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 WDR72Q3MJ13 1102 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 FAM171A1Q5VUB5 890 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 RNF168Q8IYW5 571 aaPredicted RBP19.69■□□□□ 0.74
TSSC4-210ENST00000496468 ELMO3Q96BJ8 720 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 NT5C1BQ96P26 610 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 APOBEC3GQ9HC16 384 aaKnown RBP19.69■□□□□ 0.74
TSSC4-210ENST00000496468 ALG13Q9NP73 1137 aaKnown RBP19.69■□□□□ 0.74
TSSC4-210ENST00000496468 GDAP2Q9NXN4 497 aa19.69■□□□□ 0.74
TSSC4-210ENST00000496468 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
TSSC4-210ENST00000496468 H3BNC9 293 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 CYB561D2O14569 222 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 SYN3O14994 580 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 HUS1O60921 280 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 LRRN2O75325 713 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 CSPG5O95196 566 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 EFEMP2O95967 443 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 URODP06132 367 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 TKTP29401 623 aaKnown RBP19.68■□□□□ 0.74
TSSC4-210ENST00000496468 GLUD2P49448 558 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 UBASH3AP57075 661 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 ZNF697Q5TEC3 545 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 TRIM65Q6PJ69 517 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 VPS52Q8N1B4 723 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 TOP6BLQ8N6T0 577 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 APPL2Q8NEU8 664 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 LRCH3Q96II8 777 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 MMS19Q96T76 1030 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 DSEQ9UL01 958 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 POLIQ9UNA4 740 aa19.68■□□□□ 0.74
TSSC4-210ENST00000496468 EPOPA6NHQ4 379 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 TPM3P06753 285 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 ASPAP45381 313 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 PLCB2Q00722 1185 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 LRMPQ12912 555 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 USP41Q3LFD5 358 aa19.67■□□□□ 0.74
TSSC4-210ENST00000496468 HABP4Q5JVS0 413 aaKnown RBP19.67■□□□□ 0.74
TSSC4-210ENST00000496468 KIAA1841Q6NSI8 718 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms