RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 C12orf76Q8N812 135 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-209ENST00000496189 RDH13Q8NBN7 331 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 NECAB3Q96P71 396 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-209ENST00000496189 PDE11AQ9HCR9 933 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 ZDHHC7Q9NXF8 308 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 DSEQ9UL01 958 aa17.69■□□□□ 0.42
SF3A1-209ENST00000496189 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 KRT19P08727 400 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 ARPP19P56211 112 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 LILRA4P59901 499 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 ZP2Q05996 745 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 RAB33AQ14088 237 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 PPM1LQ5SGD2 360 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 CBWD2Q8IUF1 395 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 KIAA0895Q8NCT3 520 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
SF3A1-209ENST00000496189 SUSD6Q92537 303 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 FRMD4BQ9Y2L6 1034 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 PCDHA5Q9Y5H7 936 aa17.68■□□□□ 0.42
SF3A1-209ENST00000496189 CCDC195A0A1B0GUA6 201 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 ANO9A1A5B4 782 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 PIRO00625 290 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 XYLBO75191 536 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 ITGB3P05106 788 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 CPB1P15086 417 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 TNNI1P19237 187 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 TYMPP19971 482 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 RBP5P82980 135 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 MYO1EQ12965 1108 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 DUOXA2Q1HG44 320 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 OVOS1Q6IE37 1185 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 RTL10Q7L3V2 364 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 CSGALNACT2Q8N6G5 542 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 ZSWIM2Q8NEG5 633 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 SMG7Q92540 1137 aaKnown RBP17.67■□□□□ 0.42
SF3A1-209ENST00000496189 RPGRIP1Q96KN7 1286 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 SENP8Q96LD8 212 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 FBXW11Q9UKB1 542 aa17.67■□□□□ 0.42
SF3A1-209ENST00000496189 OR6C75A6NL08 312 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 KPNA7A9QM74 516 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 ZMYND10O75800 440 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 HNRNPA1P09651 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 DLATP10515 647 aaKnown RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 RPL13P26373 211 aaKnown RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 AARSP49588 968 aaKnown RBP eCLIP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 STIM1Q13586 685 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 UVSSAQ2YD98 709 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 ZNF658Q5TYW1 1059 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 TPGS2Q68CL5 300 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 LILRA6Q6PI73 481 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 LRRC52Q8N7C0 313 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 SPATA20Q8TB22 786 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 ACSF2Q96CM8 615 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-209ENST00000496189 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 INTS13Q9NVM9 706 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 FBXL5Q9UKA1 691 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 AGAP1Q9UPQ3 857 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 ANK1P16157 1881 aa17.66■□□□□ 0.42
SF3A1-209ENST00000496189 VWA8A3KMH1 1905 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CYB561D2O14569 222 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 PRRG1O14668 218 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 HUS1O60921 280 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CLSTN1O94985 981 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 MBD3O95983 291 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 C8AP07357 584 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 POLR2BP30876 1174 aaKnown RBP17.65■□□□□ 0.42
SF3A1-209ENST00000496189 PPP1R2P41236 205 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 ROR1Q01973 937 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CYP24A1Q07973 514 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 MRPL58Q14197 206 aaKnown RBP17.65■□□□□ 0.42
SF3A1-209ENST00000496189 MYBPC2Q14324 1141 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 PSMD6Q15008 389 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CAMK4Q16566 473 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 MAFFQ9ULX9 164 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 TIMM13Q9Y5L4 95 aaPredicted RBP17.65■□□□□ 0.42
SF3A1-209ENST00000496189 PLXNA3P51805 1871 aa17.65■□□□□ 0.42
SF3A1-209ENST00000496189 PPEF2O14830 753 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 OAZ2O95190 189 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 LRG1P02750 347 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 NR3C1P04150 777 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 WEE2P0C1S8 567 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 HOXA9P31269 272 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 AP3M2P53677 418 aa17.64■□□□□ 0.41
SF3A1-209ENST00000496189 BFSP1Q12934 665 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms