RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 PNPLA4P41247 253 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 SCNN1GP51170 649 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 GSDMDP57764 484 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 RNASELQ05823 741 aaKnown RBP16.12■□□□□ 0.17
GAPDH-210ENST00000496049 MYO1EQ12965 1108 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 SGSM1Q2NKQ1 1148 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 ZNF699Q32M78 642 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 FIGNQ5HY92 759 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 NOMO2Q5JPE7 1267 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 FMNL3Q8IVF7 1028 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 C1orf127Q8N9H9 656 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 UROC1Q96N76 676 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 ZMAT2Q96NC0 199 aaKnown RBP16.12■□□□□ 0.17
GAPDH-210ENST00000496049 FAM193BQ96PV7 902 aaPredicted RBP16.12■□□□□ 0.17
GAPDH-210ENST00000496049 PPP1R10Q96QC0 940 aaKnown RBP16.12■□□□□ 0.17
GAPDH-210ENST00000496049 CEP72Q9P209 647 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 TET1Q8NFU7 2136 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 TRIP11Q15643 1979 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 A0A1W2PQJ5 194 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 MEIS3P2A8K0S8 358 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 ZBBXA8MT70 800 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 PTGESO14684 152 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 OFD1O75665 1012 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 FGFR1P11362 822 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 SLC9A1P19634 815 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 POU3F3P20264 500 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-210ENST00000496049 POLR2BP30876 1174 aaKnown RBP16.11■□□□□ 0.17
GAPDH-210ENST00000496049 KLK7P49862 253 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 NOP14P78316 857 aaKnown RBP16.11■□□□□ 0.17
GAPDH-210ENST00000496049 KCNMA1Q12791 1236 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 ZBTB6Q15916 424 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 PTPN21Q16825 1174 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 ENOSF1Q7L5Y1 443 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 LRRC52Q8N7C0 313 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 C18orf25Q96B23 403 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-210ENST00000496049 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 EDEM3Q9BZQ6 932 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 PCDHA11Q9Y5I1 949 aa16.11■□□□□ 0.17
GAPDH-210ENST00000496049 TRIOO75962 3097 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 VNN1O95497 513 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 POMCP01189 267 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 CA3P07451 260 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 TBXAS1P24557 533 aaPredicted RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 RPL9P32969 192 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 POLR2FP61218 127 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 WDR5P61964 334 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 TNNC1P63316 161 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 TUSC3Q13454 348 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 KLHDC7AQ5VTJ3 777 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 SPAG5Q96R06 1193 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 NUCKS1Q9H1E3 243 aaKnown RBP16.1■□□□□ 0.17
GAPDH-210ENST00000496049 FBXL5Q9UKA1 691 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 AGAP1Q9UPQ3 857 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 TTC3P53804 2025 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 C5orf42Q9H799 3197 aa16.1■□□□□ 0.17
GAPDH-210ENST00000496049 NRDCO43847 1150 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
GAPDH-210ENST00000496049 ASS1P00966 412 aaKnown RBP16.09■□□□□ 0.17
GAPDH-210ENST00000496049 UCHL3P15374 230 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 PAX3P23760 479 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 LRPAP1P30533 357 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 MFAP3P55082 362 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 MYL6P60660 151 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 YWHAEP62258 255 aaKnown RBP16.09■□□□□ 0.17
GAPDH-210ENST00000496049 LRMPQ12912 555 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 RAPGEF1Q13905 1077 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 SV2CQ496J9 727 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
GAPDH-210ENST00000496049 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 LMO3Q8TAP4 145 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 ARNTL2Q8WYA1 636 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 HPDLQ96IR7 371 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 FAXDC2Q96IV6 333 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 NIF3L1Q9GZT8 377 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 GANQ9H2C0 597 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 SIX4Q9UIU6 781 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 LUC7L2Q9Y383 392 aaKnown RBP16.09■□□□□ 0.17
GAPDH-210ENST00000496049 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 CACNA1HO95180 2353 aa16.09■□□□□ 0.17
GAPDH-210ENST00000496049 TBKBP1A7MCY6 615 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
GAPDH-210ENST00000496049 DCXO43602 365 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 MFAP3LO75121 409 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 UPP2O95045 317 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 GYPCP04921 128 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 TAF6P49848 677 aa16.08■□□□□ 0.16
GAPDH-210ENST00000496049 GUCY2FP51841 1108 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms