RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
CALD1-223ENST00000496024 TRAF3IP3Q9Y228 551 aa10.61□□□□□ -0.71
CALD1-223ENST00000496024 FRMD4BQ9Y2L6 1034 aa10.61□□□□□ -0.71
CALD1-223ENST00000496024 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
CALD1-223ENST00000496024 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.61□□□□□ -0.71
CALD1-223ENST00000496024 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
CALD1-223ENST00000496024 C5orf42Q9H799 3197 aa10.61□□□□□ -0.71
CALD1-223ENST00000496024 MTCL1Q9Y4B5 1905 aaKnown RBP10.6□□□□□ -0.71
CALD1-223ENST00000496024 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 GOLGA6L22H0YM25 854 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 CYB561D2O14569 222 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 SYN3O14994 580 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 TGM5O43548 720 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 CLSTN1O94985 981 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 WEE2P0C1S8 567 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 BMP1P13497 986 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 IL9P15248 144 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
CALD1-223ENST00000496024 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
CALD1-223ENST00000496024 RBP5P82980 135 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 ADAM9Q13443 819 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 STIM1Q13586 685 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 SV2CQ496J9 727 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 TJAP1Q5JTD0 557 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 SYCE2Q6PIF2 218 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 RSPO2Q6UXX9 243 aaPredicted RBP10.6□□□□□ -0.71
CALD1-223ENST00000496024 WDR49Q8IV35 697 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 SLC9A9Q8IVB4 645 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 APPL2Q8NEU8 664 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 FEZF2Q8TBJ5 459 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 PLEKHO2Q8TD55 490 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 TSG101Q99816 390 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 CLSTN2Q9H4D0 955 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 SIX4Q9UIU6 781 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 ITGA11Q9UKX5 1188 aa10.6□□□□□ -0.71
CALD1-223ENST00000496024 DOCK6Q96HP0 2047 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 TRIM49BA6NDI0 452 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 LRRIQ3A6PVS8 624 aaPredicted RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 KPNA7A9QM74 516 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 H7C4K7 107 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 M0QZQ0 153 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 PSMA7O14818 248 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 MBTPS2O43462 519 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 PHACTR2O75167 634 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ODC1P11926 461 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 BMP6P22004 513 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 CDR1P51861 262 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 PMS1P54277 932 aaKnown RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 DLG4P78352 724 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 YWHAHQ04917 246 aaPredicted RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 BIRC3Q13489 604 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 MORC3Q14149 939 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ZCWPW2Q504Y3 356 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ANKRD40Q6AI12 368 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 OVOS1Q6IE37 1185 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 CENPPQ6IPU0 288 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ZNF280DQ6N043 979 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 TMC5Q6UXY8 1006 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 TMEM184AQ6ZMB5 413 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 GPR65Q8IYL9 337 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 FAM186BQ8IYM0 893 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 KREMEN2Q8NCW0 462 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 PARD3BQ8TEW8 1205 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ZNF516Q92618 1163 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 ZNF560Q96MR9 790 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 GTPBP4Q9BZE4 634 aaKnown RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 DZANK1Q9NVP4 752 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 USP15Q9Y4E8 981 aaPredicted RBP10.59□□□□□ -0.71
CALD1-223ENST00000496024 BACE2Q9Y5Z0 518 aa10.59□□□□□ -0.71
CALD1-223ENST00000496024 CCDC195A0A1B0GUA6 201 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CETN3O15182 167 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 RFPL2O75678 378 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 AKAP3O75969 853 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CST3P01034 146 aaPredicted RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 OR4Q2P0C623 313 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 TRIM49P0CI25 452 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 TRIM49CP0CI26 452 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 KRT13P13646 458 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CPB1P15086 417 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 HOXB8P17481 243 aaPredicted RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 SP100P23497 879 aaPredicted RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 CCNE1P24864 410 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 PSMC2P35998 433 aaKnown RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 PNPLA4P41247 253 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
CALD1-223ENST00000496024 VAMP7P51809 220 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms