RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 SPP2Q13103 211 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 CCDC96Q2M329 555 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SLC35G1Q2M3R5 365 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SLFN13Q68D06 897 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 TMTC3Q6ZXV5 915 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 USP53Q70EK8 1073 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 KCTD1Q719H9 257 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 FGD2Q7Z6J4 655 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SMC1BQ8NDV3 1235 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 GMCL1P1Q8NEA9 526 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 PHKBQ93100 1093 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 DDX11Q96FC9 970 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 MAP3K14Q99558 947 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 NUP88Q99567 741 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 LLPHQ9BRT6 129 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 CPVLQ9H3G5 476 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 VCPKMTQ9H867 229 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 CAAP1Q9H8G2 361 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 AS3MTQ9HBK9 375 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 RBM28Q9NW13 759 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 NDOR1Q9UHB4 597 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 AFG3L2Q9Y4W6 797 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 PTPRFP10586 1907 aa6.32□□□□□ -1.4
GAPVD1-218ENST00000495588 CCDC196A0A1B0GTZ2 297 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 hCG_1642624A0A1W2PR95 340 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 KLRF2D3W0D1 207 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 ARVCFO00192 962 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 CYTH3O43739 400 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 DHX16O60231 1041 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TOMM70O94826 608 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 NPTXRO95502 500 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 DBHP09172 617 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 MYCLP1P12525 358 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 NCAM1P13591 858 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 IFNAR1P17181 557 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 PAMP19021 973 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TACR2P21452 398 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 IBSPP21815 317 aaPredicted RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 GJB2P29033 226 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 SLC16A2P36021 539 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 HMGCS2P54868 508 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 BACE1P56817 501 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 FKBP1BP68106 108 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 PPATQ06203 517 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 ZNF543Q08ER8 600 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 PPP2R5BQ15173 497 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 ASPRV1Q53RT3 343 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 FAM83BQ5T0W9 1011 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 GPATCH4Q5T3I0 446 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 KCNT2Q6UVM3 1135 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 NAT16Q8N8M0 369 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 C2orf69Q8N8R5 385 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TMEM52Q8NDY8 209 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 OPTNQ96CV9 577 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 AIFM3Q96NN9 605 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 PHF20Q9BVI0 1012 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 TARS2Q9BW92 718 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 SLC26A6Q9BXS9 759 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 UBA5Q9GZZ9 404 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 SH2D4AQ9H788 454 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 CLEC1BQ9P126 229 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 SMC3Q9UQE7 1217 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 MYH6P13533 1939 aa6.31□□□□□ -1.4
GAPVD1-218ENST00000495588 NPHP3-ACAD11A0A0J9YXS1 232 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 C19orf81C9J6K1 198 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 TMEM232C9JQI7 657 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 CDKL5O76039 1030 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 VCAM1P19320 739 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 DDIT3P35638 169 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 GNAQP50148 359 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 USP14P54578 494 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 HMGN5P82970 282 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 DLX2Q07687 328 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 PPIL2Q13356 520 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 PKP1Q13835 747 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 MBLAC2Q68D91 279 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 BICRALQ6AI39 1079 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 CPLX2Q6PUV4 134 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 LBX2Q6XYB7 198 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 ERO1BQ86YB8 467 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 Q8N1Y9 231 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 PPM1KQ8N3J5 372 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 RCBTB1Q8NDN9 531 aa6.3□□□□□ -1.4
GAPVD1-218ENST00000495588 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms