RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 ATG4AQ8WYN0 398 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 RAPGEF5Q92565 580 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 TCHPQ9BT92 498 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 PARVAQ9NVD7 372 aa16.31■□□□□ 0.2
CALD1-222ENST00000495522 POLR2AP24928 1970 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 GAS2O43903 313 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 AGTP01019 485 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 RALAP11233 206 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 SSTR3P32745 418 aaPredicted RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 TNFSF9P41273 254 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 PPARDQ03181 441 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 KLF1Q13351 362 aaPredicted RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 ZBTB8OSQ8IWT0 167 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 ATL2Q8NHH9 583 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 ZNF606Q8WXB4 792 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 ACO2Q99798 780 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 STMN4Q9H169 189 aaPredicted RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 LRRC37A2A6NM11 1700 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 TAS2R40P59535 323 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 CAV1Q03135 178 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 LAMTOR4Q0VGL1 99 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 UBAP2Q5T6F2 1119 aaKnown RBP16.3■□□□□ 0.2
CALD1-222ENST00000495522 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 RHBDF2Q6PJF5 856 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 EXOC8Q8IYI6 725 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 EXD1Q8NHP7 514 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 FEZF2Q8TBJ5 459 aa16.3■□□□□ 0.2
CALD1-222ENST00000495522 SMIM23A6NLE4 172 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 OGTO15294 1046 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 TP73O15350 636 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
CALD1-222ENST00000495522 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
CALD1-222ENST00000495522 PRKCBP05771 671 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 MMP13P45452 471 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 SURF1Q15526 300 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 ZNF568Q3ZCX4 644 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 ROPN1BQ9BZX4 212 aaPredicted RBP16.29■□□□□ 0.2
CALD1-222ENST00000495522 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 ROPN1Q9HAT0 212 aaPredicted RBP16.29■□□□□ 0.2
CALD1-222ENST00000495522 IP6K2Q9UHH9 426 aa16.29■□□□□ 0.2
CALD1-222ENST00000495522 R3HDM2Q9Y2K5 976 aaKnown RBP16.29■□□□□ 0.2
CALD1-222ENST00000495522 O00370 1275 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 RASGRF2O14827 1237 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 LSM8O95777 96 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 SRGAP2CP0DJJ0 459 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 ATF2P15336 505 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MMP8P22894 467 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 IVDP26440 423 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 PSEN1P49768 467 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 CCNG2Q16589 344 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MAPK6Q16659 721 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 DUOXA2Q1HG44 320 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 ARMC9Q7Z3E5 817 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 YTHDF3Q7Z739 585 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 UHMK1Q8TAS1 419 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 EPS8L3Q8TE67 593 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 GPR20Q99678 358 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 CDC42EP4Q9H3Q1 356 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 AAASQ9NRG9 546 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 A0A0G2JLL6 359 aaPredicted RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 LGR5O75473 907 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 CALB1P05937 261 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MARK3P27448 753 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 CETN2P41208 172 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MCL1Q07820 350 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 ERMARDQ5T6L9 678 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 PRRT2Q7Z6L0 340 aaPredicted RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 RNF149Q8NC42 400 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 MDM1Q8TC05 714 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
CALD1-222ENST00000495522 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
CALD1-222ENST00000495522 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms