RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 EBAG9O00559 213 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 OPA1O60313 960 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 GNAT1P11488 350 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 HOXC8P31273 242 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 CCT5P48643 541 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 FLT3LGP49771 235 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 EPHB4P54760 987 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 MYL6P60660 151 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 GPC5P78333 572 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 DCAF4L1Q3SXM0 396 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 SPATA4Q8NEY3 305 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 TRIB2Q92519 343 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 TAF4BQ92750 862 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 DMGDHQ9UI17 866 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 GRIN2DO15399 1336 aa19.78■□□□□ 0.76
TSPAN4-212ENST00000494815 CES2O00748 559 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 EIF3HO15372 352 aaKnown RBP eCLIP19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 TOMM70O94826 608 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 CLSTN1O94985 981 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 GJA9P57773 515 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 UBR7Q8N806 425 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 HDAC7Q8WUI4 952 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 ARHGEF26Q96DR7 871 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 FAXDC2Q96IV6 333 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 GABRQQ9UN88 632 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 PCDHB4Q9Y5E5 795 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 ANK1P16157 1881 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 UMODL1Q5DID0 1318 aa19.77■□□□□ 0.76
TSPAN4-212ENST00000494815 LACTBL1A8MY62 500 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 TNFRSF8P28908 595 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 RPS6KA1Q15418 735 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 EMBQ6PCB8 327 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 TMEM270Q6UE05 265 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 RUFY4Q6ZNE9 571 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 XYLT2Q9H1B5 865 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 OSGEPQ9NPF4 335 aa19.77■□□□□ 0.75
TSPAN4-212ENST00000494815 C17orf102A2RUQ5 167 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 C6orf222P0C671 652 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 DARSP14868 501 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 HIC1Q14526 733 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 SKIDA1Q1XH10 827 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 CLEC16AQ2KHT3 1053 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 ZNF699Q32M78 642 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 ALS2CLQ60I27 953 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 DAAM2Q86T65 1068 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 NT5DC4Q86YG4 428 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 MICALL1Q8N3F8 863 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 ACAP3Q96P50 834 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 KIF4AO95239 1232 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 NFICP08651 508 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 CXCR5P32302 372 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 GRM5P41594 1212 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 ZNF132P52740 706 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 TMEM62Q0P6H9 643 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 SLC10A6Q3KNW5 377 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 CCDC181Q5TID7 509 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 ACAD10Q6JQN1 1059 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 TRIM72Q6ZMU5 477 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 CATSPER4Q7RTX7 472 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 PEX26Q7Z412 305 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 SUGP1Q8IWZ8 645 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 CD302Q8IX05 232 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 C7orf31Q8N865 590 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 RBBP8NLQ8NC74 664 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 BCAS4Q8TDM0 211 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 PSMB7Q99436 277 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 UPF3AQ9H1J1 476 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 GTF3C4Q9UKN8 822 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 GINS2Q9Y248 185 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 FAM169AQ9Y6X4 670 aa19.76■□□□□ 0.75
TSPAN4-212ENST00000494815 MROH7Q68CQ1 1323 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 MEFVO15553 781 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 TREHO43280 583 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 BUB1BO60566 1050 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 MTA2O94776 668 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 EIF4BP23588 611 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 HOXA11P31270 313 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 PAFAH1B1P43034 410 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 GNGT1P63211 74 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 NKX3-2P78367 333 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 PRKCZQ05513 592 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 CFAP221Q4G0U5 840 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 SCARA3Q6AZY7 606 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 JADE1Q6IE81 842 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 NME8Q8N427 588 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 DNAJB3Q8WWF6 145 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 CAVIN3Q969G5 261 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 OSMRQ99650 979 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 SPC25Q9HBM1 224 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 STIM2Q9P246 746 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 C2CD2Q9Y426 696 aa19.75■□□□□ 0.75
TSPAN4-212ENST00000494815 A6NNZ2 444 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 SEPT4O43236 478 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 UNGP13051 313 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 AXLP30530 894 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 GNA15P30679 374 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 SKOR1P84550 965 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 TUBB8Q3ZCM7 444 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
TSPAN4-212ENST00000494815 SLC27A1Q6PCB7 646 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms