RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	MYH16	Q9H6N6	1097 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	NEU2	Q9Y3R4	380 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	PCDHA13	Q9Y5I0	950 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	KLHL33	A6NCF5	533 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ORC4	O43929	436 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	NDUFS2	O75306	463 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	AGFG2	O95081	481 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ZFPL1	O95159	310 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	FCER1A	P12319	257 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	FOLR3	P41439	243 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	FPGS	Q05932	587 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ZNF844	Q08AG5	666 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ACAP2	Q15057	778 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	UTP14C	Q5TAP6	766 aa	Known RBP	5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ZKSCAN2	Q63HK3	967 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	CLNK	Q7Z7G1	428 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	ZNF384	Q8TF68	577 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	JADE3	Q92613	823 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	INTS13	Q9NVM9	706 aa		5.76	□□□□□ -1.49
CCDC66-222	ENST00000494672	PRAMEF33	A0A0G2JMD5	474 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672		A0A1W2PS29	197 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	GRM6	O15303	877 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	YY2	O15391	372 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	PRAMEF10	O60809	474 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	SRGN	P10124	158 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	RPS7	P62081	194 aa	Known RBP	5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	TARDBP	Q13148	414 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	SF3B3	Q15393	1217 aa	Known RBP	5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	INAVA	Q3KP66	663 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	PPP4R3A	Q6IN85	833 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	CASC1	Q6TDU7	716 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	DCBLD1	Q8N8Z6	715 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	IL17RD	Q8NFM7	739 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	FAXDC2	Q96IV6	333 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	SPC25	Q9HBM1	224 aa		5.75	□□□□□ -1.49
CCDC66-222	ENST00000494672	CCDC151	A5D8V7	595 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	MGST3	O14880	152 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	MPPED1	O15442	326 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	SGTA	O43765	313 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	RPLP2	P05387	115 aa	Known RBP	5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	CDK4	P11802	303 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	KCNA2	P16389	499 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	SLC6A4	P31645	630 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	NHLH1	Q02575	133 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	RAB39A	Q14964	217 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	AKNAD1	Q5T1N1	836 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	KAZN	Q674X7	775 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	VWA1	Q6PCB0	445 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	TSHZ1	Q6ZSZ6	1077 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	AOPEP	Q8N6M6	819 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	IFI44	Q8TCB0	444 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	RAB24	Q969Q5	203 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	PACSIN1	Q9BY11	444 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	KRTAP9-8	Q9BYQ0	159 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	JKAMP	Q9P055	326 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	TUBD1	Q9UJT1	453 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	MRFAP1	Q9Y605	127 aa		5.74	□□□□□ -1.49
CCDC66-222	ENST00000494672	PROP1	O75360	226 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	SLC43A1	O75387	559 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	IARS	P41252	1262 aa	Known RBP	5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	IRX3	P78415	501 aa	Predicted RBP	5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	NBPF8	Q3BBV2	869 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	GORAB	Q5T7V8	394 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	GADL1	Q6ZQY3	521 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	RINL	Q6ZS11	566 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	TMEM125	Q96AQ2	219 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	FBXL20	Q96IG2	436 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	TLR10	Q9BXR5	811 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	KLK15	Q9H2R5	256 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	TERF2IP	Q9NYB0	399 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	PRDM4	Q9UKN5	801 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	CDYL	Q9Y232	598 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	ATP8A1	Q9Y2Q0	1164 aa		5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.73	□□□□□ -1.49
CCDC66-222	ENST00000494672	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	TPD52L2	O43399	206 aa	Known RBP	5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	XPOT	O43592	962 aa	Known RBP	5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	MATN4	O95460	622 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	SBK3	P0C264	359 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	C5AR1	P21730	350 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	DYRK1A	Q13627	763 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	KIAA0895L	Q68EN5	471 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	CBARP	Q8N350	705 aa	Predicted RBP	5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	SLC30A5	Q8TAD4	765 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	CLPTM1L	Q96KA5	538 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	UROC1	Q96N76	676 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	MAN1C1	Q9NR34	630 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	CALCOCO1	Q9P1Z2	691 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	IPP	Q9Y573	584 aa		5.72	□□□□□ -1.49
CCDC66-222	ENST00000494672	PROM1	O43490	865 aa		5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	C1QL1	O75973	258 aa		5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	MT-CO1	P00395	513 aa		5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	MYBL2	P10244	700 aa		5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	GATA3	P23771	443 aa		5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	ZNF280A	P59817	542 aa	Predicted RBP	5.71	□□□□□ -1.5
CCDC66-222	ENST00000494672	PIGF	Q07326	219 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms