RNA–Protein interactions for RNA: ENST00000494669.2

FGD3-208, Transcript of FYVE, RhoGEF and PH domain containing 3, human

TSL 3

Gene FGD3, Length 915 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD3-208	ENST00000494669	SMIM28	A0A1B0GU29	152 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	TISP43	B9A030	160 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669		K7ENM7	598 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	ACTN4	O43707	911 aa	Known RBP	13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	KIN	O60870	393 aa	Known RBP	13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	XYLB	O75191	536 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	TH	P07101	528 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	HARS	P12081	509 aa	Known RBP	13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	CASP1	P29466	404 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	HOXD13	P35453	343 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SOX4	Q06945	474 aa	Predicted RBP	13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SEZ6	Q53EL9	994 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SLC44A4	Q53GD3	710 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	ZBTB41	Q5SVQ8	909 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SUMF1	Q8NBK3	374 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	GLIS3	Q8NEA6	775 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	ING5	Q8WYH8	240 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SPATA32	Q96LK8	384 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	DDX23	Q9BUQ8	820 aa	Known RBP	13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	BCO2	Q9BYV7	579 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	SEL1L	Q9UBV2	794 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	KCNH3	Q9ULD8	1083 aa		13.53	□□□□□ -0.24
FGD3-208	ENST00000494669	GPR179	Q6PRD1	2367 aa		13.52	□□□□□ -0.24
FGD3-208	ENST00000494669		A0A1B0GVL5	298 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	FAM170B	A6NMN3	283 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	CLDN3	O15551	220 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	LAMTOR5	O43504	91 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	KCNE1	P15382	129 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	PFKFB1	P16118	471 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	GAP43	P17677	238 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	ADSS	P30520	456 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	HOXA9	P31269	272 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	OR1D2	P34982	312 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	TNFSF9	P41273	254 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	OSTN	P61366	133 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	NUCB2	P80303	420 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	PRKCQ	Q04759	706 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	CSTF1	Q05048	431 aa	Known RBP	13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	PABPC1L	Q4VXU2	614 aa	Known RBP	13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	NPAS3	Q8IXF0	933 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	HPS3	Q969F9	1004 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	PANK4	Q9NVE7	773 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	TBC1D7	Q9P0N9	293 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	CNTN3	Q9P232	1028 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	ANKFY1	Q9P2R3	1169 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	DNMT3B	Q9UBC3	853 aa	Known RBP	13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	SERTAD1	Q9UHV2	236 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	MIA3	Q5JRA6	1907 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	FANCM	Q8IYD8	2048 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	CACNA1I	Q9P0X4	2223 aa		13.52	□□□□□ -0.25
FGD3-208	ENST00000494669	TTC26	A0AVF1	554 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	KLRC4	O43908	158 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	SLFN14	P0C7P3	912 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	ELAVL2	Q12926	359 aa	Known RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	RAB33A	Q14088	237 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	ZBTB6	Q15916	424 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	ZNF528	Q3MIS6	628 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	GLRA4	Q5JXX5	417 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	PDXDC1	Q6P996	788 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	GRAMD1C	Q8IYS0	662 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	TMEM130	Q8N3G9	435 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	HVCN1	Q96D96	273 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	ACAP3	Q96P50	834 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	TCHP	Q9BT92	498 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	CCDC94	Q9BW85	323 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	GOLPH3L	Q9H4A5	285 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	MAGEF1	Q9HAY2	307 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	LTB4R2	Q9NPC1	389 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	FAM13B	Q9NYF5	915 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	FBXO4	Q9UKT5	387 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	ATP6V1D	Q9Y5K8	247 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	CDY1	Q9Y6F8	540 aa		13.51	□□□□□ -0.25
FGD3-208	ENST00000494669	PATJ	Q8NI35	1801 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	ACACB	O00763	2458 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669		A0A1W2PQ27	194 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669		A0A1W2PQ64	194 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669		A0A1W2PQD8	194 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	IDE	P14735	1019 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	FGFR3	P22607	806 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	ABCD1	P33897	745 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	LIG4	P49917	911 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	NDUFA8	P51970	172 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	PFKP	Q01813	784 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	CUL4B	Q13620	913 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	ENOX2	Q16206	610 aa	Known RBP	13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	UPP1	Q16831	310 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	SLC5A9	Q2M3M2	681 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	L1TD1	Q5T7N2	865 aa	Known RBP	13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	TPRG1	Q6ZUI0	275 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	C3orf58	Q8NDZ4	430 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	ZSWIM2	Q8NEG5	633 aa		13.5	□□□□□ -0.25
FGD3-208	ENST00000494669	MCRS1	Q96EZ8	462 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms