RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LMCD1Q9NZU5 365 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 R3HCC1Q9Y3T6 440 aaKnown RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 BICDL2A1A5D9 508 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 OR4Q2P0C623 313 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 EPCAMP16422 314 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 KCNA5P22460 613 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 TAF6P49848 677 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 MYL6P60660 151 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 POU5F1Q01860 360 aaKnown RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 SURF1Q15526 300 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 PSMD5Q16401 504 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 NFIL3Q16649 462 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 RBM43Q6ZSC3 357 aaKnown RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 MLKLQ8NB16 471 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 LNX1Q8TBB1 728 aaPredicted RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 SUSD3Q96L08 255 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 PI4K2AQ9BTU6 479 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 CDH22Q9UJ99 828 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 ITGA11Q9UKX5 1188 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 HCFC2Q9Y5Z7 792 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 CDY1Q9Y6F8 540 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 SYCE3A1L190 88 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 KPNA7A9QM74 516 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 CYB561D2O14569 222 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 HCRTO43612 131 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 GLP2RO95838 553 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 FGFR3P22607 806 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 NDUFV1P49821 464 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 RBP5P82980 135 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 TRPC3Q13507 836 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 MYBPC2Q14324 1141 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 NFKBIBQ15653 356 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 TPD52L1Q16890 204 aaPredicted RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 SV2AQ7L0J3 742 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 HPDLQ96IR7 371 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 GTPBP4Q9BZE4 634 aaKnown RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 DNAJC25Q9H1X3 360 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 NXF1Q9UBU9 619 aaKnown RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 RWDD2AQ9UIY3 292 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 BRWD1Q9NSI6 2320 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 CARNS1A5YM72 827 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 LILRB3O75022 631 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 TBX10O75333 385 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 OR1D2P34982 312 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 PPP1R2P41236 205 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 ELAVL2Q12926 359 aaKnown RBP11.98□□□□□ -0.49
APTX-230ENST00000494649 DUSP6Q16828 381 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 WSCD1Q658N2 575 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 SPOPLQ6IQ16 392 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 PPP2R3CQ969Q6 453 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 BORCS6Q96GS4 357 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 ZNF560Q96MR9 790 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 TSPAN18Q96SJ8 248 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 TMEM209Q96SK2 561 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 MMS19Q96T76 1030 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 CLSTN3Q9BQT9 956 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 EMILIN2Q9BXX0 1053 aa11.98□□□□□ -0.49
APTX-230ENST00000494649 VNN1O95497 513 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 C4BPAP04003 597 aaKnown RBP11.97□□□□□ -0.49
APTX-230ENST00000494649 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 YWHAHQ04917 246 aaPredicted RBP11.97□□□□□ -0.49
APTX-230ENST00000494649 NCOA4Q13772 614 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 WDR72Q3MJ13 1102 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 SV2CQ496J9 727 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 CTXN3Q4LDR2 81 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 CBWD6Q4V339 395 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 CBWD3Q5JTY5 395 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 CBWD5Q5RIA9 395 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 USP37Q86T82 979 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 C12orf76Q8N812 135 aaPredicted RBP11.97□□□□□ -0.49
APTX-230ENST00000494649 TAS1R2Q8TE23 839 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 PGLYRP2Q96PD5 576 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 ARMCX3Q9UH62 379 aaPredicted RBP11.97□□□□□ -0.49
APTX-230ENST00000494649 POLIQ9UNA4 740 aa11.97□□□□□ -0.49
APTX-230ENST00000494649 M0QZQ0 153 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 WEE2P0C1S8 567 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 ODC1P11926 461 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 ACAT1P24752 427 aaKnown RBP11.96□□□□□ -0.49
APTX-230ENST00000494649 RAP1GAPP47736 663 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.49
APTX-230ENST00000494649 TYRO3Q06418 890 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 MYO1EQ12965 1108 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 CCDC142Q17RM4 750 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 OVOS1Q6IE37 1185 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
APTX-230ENST00000494649 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
APTX-230ENST00000494649 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms