RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ELF4Q99607 663 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 OR10A2Q9H208 303 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 VPS11Q9H270 941 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSPY26PQ9H489 355 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 RCOR1Q9UKL0 485 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 COL4A6Q14031 1691 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 IKBKBO14920 756 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PLD2O14939 933 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CUTAO60888 179 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 IGFALSP35858 605 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 GRIK3Q13003 919 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZMAT1Q5H9K5 638 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CCDC158Q5M9N0 1113 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 BEND6Q5SZJ8 279 aaPredicted RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRAMEF9Q5VWM5 478 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 SPTY2D1Q68D10 685 aaPredicted RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 USP30Q70CQ3 517 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 KIAA1958Q8N8K9 716 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXOC4Q96A65 974 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TXLNGYQ9BZA5 131 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TTYH3Q9C0H2 523 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 MED4Q9NPJ6 270 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PUF60Q9UHX1 559 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 DNAI1Q9UI46 699 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 AGPSO00116 658 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 SYF2O95926 243 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 OAS1P00973 400 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 C1SP09871 688 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 NAT1P18440 290 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PABPC4Q13310 644 aaKnown RBP eCLIP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 SYNE3Q6ZMZ3 975 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZC3H3Q8IXZ2 948 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CCDC146Q8IYE0 955 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 OR5AN1Q8NGI8 311 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 IL17DQ8TAD2 202 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CACTINQ8WUQ7 758 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 AZIN2Q96A70 460 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 RNPC3Q96LT9 517 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TIGD1Q96MW7 591 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 GOLPH3LQ9H4A5 285 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PCIF1Q9H4Z3 704 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMEM260Q9NX78 707 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 MAGEC2Q9UBF1 373 aaPredicted RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 MCM8Q9UJA3 840 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 SH3BP1Q9Y3L3 701 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ASB1Q9Y576 335 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 RBM8AQ9Y5S9 174 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 H3BQF6 201 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ERC2O15083 957 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TPD52L2O43399 206 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 RAD17O75943 681 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CFBP00751 764 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 SDHAP31040 664 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ATP2C1P98194 919 aaPredicted RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 RIN1Q13671 783 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 DPP8Q6V1X1 898 aaPredicted RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 HSCBQ8IWL3 235 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 CD302Q8IX05 232 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 FTSJ3Q8IY81 847 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 ATL2Q8NHH9 583 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TBC1D22AQ8WUA7 517 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMEM174Q8WUU8 243 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 RPL10LQ96L21 214 aaKnown RBP2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 TLR9Q9NR96 1032 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PLA2G3Q9NZ20 509 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 LCMT1Q9UIC8 334 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXOC6BQ9Y2D4 811 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 HS3ST3A1Q9Y663 406 aa2.92□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRPF3O43395 683 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 RASSF9O75901 435 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FSBPO95073 299 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 APOL3O95236 402 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FAM163BP0C2L3 166 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 HNRNPLP14866 589 aaKnown RBP eCLIP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 MEOX1P50221 254 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 PLCB4Q15147 1175 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SEPT7Q16181 437 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLFN12LQ6IEE8 588 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 RNF207Q6ZRF8 634 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 MAB21L3Q8N8X9 362 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 EIF1ADQ8N9N8 165 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ANKRD53Q8N9V6 530 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FBXO18Q8NFZ0 1043 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 GPHA2Q96T91 129 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC12A5Q9H2X9 1139 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 KLHL33A6NCF5 533 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 C2orf78A6NCI8 922 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC26A4O43511 780 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ADCY5O95622 1261 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSPY4P0CV99 314 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSPY10P0CW01 314 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 U2AF2P26368 475 aaKnown RBP eCLIP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 APEX1P27695 318 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRKD1Q15139 912 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 PTPAQ15257 358 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 NRN1LQ496H8 165 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 CC2D1AQ6P1N0 951 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 CNNM4Q6P4Q7 775 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FAM228AQ86W67 206 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 MREGQ8N565 214 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms