RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 LEMD2Q8NC56 503 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 IRF7Q92985 503 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 ASAH2Q9NR71 780 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 DLL3Q9NYJ7 618 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 NCDNQ9UBB6 729 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 NDRG2Q9UN36 371 aaKnown RBP18.94■□□□□ 0.62
COL9A1-210ENST00000493682 PDCD11Q14690 1871 aaKnown RBP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 NPHP3-ACAD11A0A0J9YXS1 232 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 TTC26A0AVF1 554 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 CLTAP09496 248 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 PLA2G4BP0C869 781 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 PSMC3P17980 439 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 LRPAP1P30533 357 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 GDI1P31150 447 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 VIPR2P41587 438 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 MATR3P43243 847 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 YWHAHQ04917 246 aaPredicted RBP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 ZBTB6Q15916 424 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 RILPL1Q5EBL4 403 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 MCTP1Q6DN14 999 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 KCTD17Q8N5Z5 321 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 BEST2Q8NFU1 509 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 ZSCAN18Q8TBC5 510 aaPredicted RBP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 KIF12Q96FN5 646 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 EPC1Q9H2F5 836 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 TRPV4Q9HBA0 871 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 ZNF334Q9HCZ1 680 aaPredicted RBP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 TRPV5Q9NQA5 729 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 KCND2Q9NZV8 630 aa18.93■□□□□ 0.62
COL9A1-210ENST00000493682 TIMM13Q9Y5L4 95 aaPredicted RBP18.93■□□□□ 0.62
COL9A1-210ENST00000493682 GPR179Q6PRD1 2367 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 VNN2O95498 520 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 TEAD2Q15562 447 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 ARSHQ5FYA8 562 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 SHKBP1Q8TBC3 707 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 DEPDC1BQ8WUY9 529 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 FAM3CQ92520 227 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 BICD1Q96G01 975 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 PGLYRP2Q96PD5 576 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 CHRDQ9H2X0 955 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 SMG5Q9UPR3 1016 aaKnown RBP18.92■□□□□ 0.62
COL9A1-210ENST00000493682 YIPF1Q9Y548 306 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 PIAS3Q9Y6X2 628 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 NCANO14594 1321 aa18.92■□□□□ 0.62
COL9A1-210ENST00000493682 COL4A2P08572 1712 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 VWA3AA6NCI4 1184 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 H0YCG3 227 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 OR4Q2P0C623 313 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 TNFSF9P41273 254 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 AARSP49588 968 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 NCKAP1LP55160 1127 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 RSPO4Q2I0M5 234 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 TMEM119Q4V9L6 283 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 CDK5RAP3Q96JB5 506 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 OXCT2Q9BYC2 517 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 FAM126AQ9BYI3 521 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 CRISPLD1Q9H336 500 aa18.91■□□□□ 0.62
COL9A1-210ENST00000493682 LARSQ9P2J5 1176 aaKnown RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 UBQLN1Q9UMX0 589 aaKnown RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-210ENST00000493682 LACTBL1A8MY62 500 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 ZNF263O14978 683 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 TDGF1P13385 188 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 CYP3A5P20815 502 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 GUCY2FP51841 1108 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 PPP2R3AQ06190 1150 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 DUSP4Q13115 394 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 MAMSTRQ6ZN01 415 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 HAUS6Q7Z4H7 955 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 USP37Q86T82 979 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 MFSD6LQ8IWD5 586 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 KCNN1Q92952 543 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 LRRC3Q9BY71 257 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 GPR88Q9GZN0 384 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 DNAJC25Q9H1X3 360 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 SLITRK6Q9H5Y7 841 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 LMAN1LQ9HAT1 526 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
COL9A1-210ENST00000493682 DNAH14Q0VDD8 3507 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 OR6C75A6NL08 312 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 HEPACAM2A8MVW5 462 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 ARNTLO00327 626 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 FAM189A1O60320 539 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 LIG4P49917 911 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 EPHB3P54753 998 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 GPR17Q13304 367 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 PLD1Q13393 1074 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 ENOX2Q16206 610 aaKnown RBP18.89■□□□□ 0.61
COL9A1-210ENST00000493682 KYAT1Q16773 422 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 ARL6IP4Q66PJ3 421 aaKnown RBP18.89■□□□□ 0.61
COL9A1-210ENST00000493682 DSTYKQ6XUX3 929 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 TMC8Q8IU68 726 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 GPR161Q8N6U8 529 aaKnown RBP18.89■□□□□ 0.61
COL9A1-210ENST00000493682 SECISBP2LQ93073 1101 aaKnown RBP18.89■□□□□ 0.61
COL9A1-210ENST00000493682 RSPRY1Q96DX4 576 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 IER2Q9BTL4 223 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 TBX20Q9UMR3 447 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 MYH11P35749 1972 aa18.89■□□□□ 0.61
COL9A1-210ENST00000493682 TICRRQ7Z2Z1 1910 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms