RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SCFD1Q8WVM8 642 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 SMG7Q92540 1137 aaKnown RBP7.55□□□□□ -1.2
TOP3A-207ENST00000493648 RHOBTB2Q9BYZ6 727 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 PRKD2Q9BZL6 878 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 GOLPH3LQ9H4A5 285 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 HOOK1Q9UJC3 728 aaKnown RBP7.55□□□□□ -1.2
TOP3A-207ENST00000493648 FBXL5Q9UKA1 691 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 PLXNA3P51805 1871 aa7.55□□□□□ -1.2
TOP3A-207ENST00000493648 UNC80Q8N2C7 3258 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ANK1P16157 1881 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 KPNA7A9QM74 516 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 PI4K2BG5E9Z4 385 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 CLIC2O15247 247 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ADAM12O43184 909 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 CALUO43852 315 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 XYLBO75191 536 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RFPL2O75678 378 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ABLIM3O94929 683 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 OAZ2O95190 189 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TNNC2P02585 160 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 C8AP07357 584 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 HNRNPA1P09651 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ODC1P11926 461 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TYMPP19971 482 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 PNPLA4P41247 253 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 AARSP49588 968 aaKnown RBP eCLIP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TAF6P49848 677 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RBP5P82980 135 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 YWHAHQ04917 246 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 DPYDQ12882 1025 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 STK4Q13043 487 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 SNRNP35Q16560 246 aaKnown RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 SV2CQ496J9 727 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TPGS2Q68CL5 300 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RSPO2Q6UXX9 243 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 OTOP3Q7RTS5 596 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 METTL23Q86XA0 190 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 C12orf56Q8IXR9 622 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 THEM5Q8N1Q8 247 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 CSGALNACT2Q8N6G5 542 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TDRD5Q8NAT2 981 aaKnown RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ZSWIM2Q8NEG5 633 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 ANKRD36BP1Q96IX9 119 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 SENP8Q96LD8 212 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 C1QTNF1Q9BXJ1 281 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 POMKQ9H5K3 350 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 PDE11AQ9HCR9 933 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TSHZ2Q9NRE2 1034 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 RMND1Q9NWS8 449 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 FBXW11Q9UKB1 542 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 DSEQ9UL01 958 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 MAFFQ9ULX9 164 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 AGAP1Q9UPQ3 857 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
TOP3A-207ENST00000493648 TIMM13Q9Y5L4 95 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-207ENST00000493648 OR6C75A6NL08 312 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 PDXKO00764 312 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CYB561D2O14569 222 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 PRRG1O14668 218 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 PPEF2O14830 753 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 SPTLC1O15269 473 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 DCXO43602 365 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 EXOC3O60645 756 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 PRPF40AO75400 957 aaKnown RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 RHOBTB3O94955 611 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 SMC2O95347 1197 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 PAPLNO95428 1278 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ITGB3P05106 788 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CYP11A1P05108 521 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 KRT19P08727 400 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CPB1P15086 417 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ATF2P15336 505 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 TNNI1P19237 187 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 SP100P23497 879 aaPredicted RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 HOXA9P31269 272 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CYP2J2P51589 502 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ROR1Q01973 937 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 FAM160A1Q05DH4 1040 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 MYBPC2Q14324 1141 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 KCNB1Q14721 858 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 OVOS1Q6IE37 1185 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 WDR49Q8IV35 697 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 EFCAB13Q8IY85 973 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 KIAA0895Q8NCT3 520 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ENGASEQ8NFI3 743 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms