RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 FAM200AQ8TCP9 573 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 DDX12PQ92771 950 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 TCHPQ9BT92 498 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 ARHGAP28Q9P2N2 729 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
SND1-215ENST00000492772 YIPF1Q9Y548 306 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 NCANO14594 1321 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 GREB1Q4ZG55 1949 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 ZFHX4Q86UP3 3567 aa12.02□□□□□ -0.48
SND1-215ENST00000492772 JAK2O60674 1132 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 GJA1P17302 382 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 MARCKSP29966 332 aaPredicted RBP12.02□□□□□ -0.49
SND1-215ENST00000492772 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.494e-8■■■■■ 33.6
SND1-215ENST00000492772 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 RALGPS2Q86X27 583 aaPredicted RBP12.02□□□□□ -0.49
SND1-215ENST00000492772 BEST2Q8NFU1 509 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
SND1-215ENST00000492772 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.49
SND1-215ENST00000492772 C17orf75Q9HAS0 396 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 KMT5AQ9NQR1 393 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.49
SND1-215ENST00000492772 LRWD1Q9UFC0 647 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 KIAA1024Q9UPX6 916 aa12.02□□□□□ -0.49
SND1-215ENST00000492772 MYBPHLA2RUH7 354 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 SLC38A8A6NNN8 435 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 K7ESF4 209 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 M0QZQ0 153 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 ABLIM1O14639 778 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 HRO43593 1189 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 HIP1RO75146 1068 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 FGF19O95750 216 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
SND1-215ENST00000492772 HOXA6P31267 233 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 EPHB3P54753 998 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 YWHAHQ04917 246 aaPredicted RBP12.01□□□□□ -0.49
SND1-215ENST00000492772 DMWDQ09019 674 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.494e-9■■□□□ 14.4
SND1-215ENST00000492772 ZNF174Q15697 407 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 ECM1Q16610 540 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 TTC38Q5R3I4 469 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 CEP68Q76N32 757 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 TAS1R3Q7RTX0 852 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 TMC8Q8IU68 726 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 SYNPOQ8N3V7 929 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 SNX29Q8TEQ0 813 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 CHAMP1Q96JM3 812 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 RAB34Q9BZG1 259 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
SND1-215ENST00000492772 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
SND1-215ENST00000492772 KIF26AQ9ULI4 1882 aaPredicted RBP12.01□□□□□ -0.49
SND1-215ENST00000492772 TSC2P49815 1807 aa12□□□□□ -0.49
SND1-215ENST00000492772 A0A1W2PRU2 124 aa12□□□□□ -0.49
SND1-215ENST00000492772 OR6C75A6NL08 312 aa12□□□□□ -0.49
SND1-215ENST00000492772 DPYSL4O14531 572 aa12□□□□□ -0.49
SND1-215ENST00000492772 TOM1L1O75674 476 aa12□□□□□ -0.49
SND1-215ENST00000492772 OAZ2O95190 189 aa12□□□□□ -0.49
SND1-215ENST00000492772 CTHP32929 405 aa12□□□□□ -0.49
SND1-215ENST00000492772 ALDH1A3P47895 512 aa12□□□□□ -0.49
SND1-215ENST00000492772 SOX9P48436 509 aa12□□□□□ -0.49
SND1-215ENST00000492772 TRAPPC10P48553 1259 aa12□□□□□ -0.49
SND1-215ENST00000492772 LIMK1P53667 647 aa12□□□□□ -0.49
SND1-215ENST00000492772 STRN3Q13033 797 aa12□□□□□ -0.49
SND1-215ENST00000492772 SRSF5Q13243 272 aaKnown RBP12□□□□□ -0.49
SND1-215ENST00000492772 PDIA5Q14554 519 aa12□□□□□ -0.49
SND1-215ENST00000492772 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
SND1-215ENST00000492772 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
SND1-215ENST00000492772 IL31Q6EBC2 164 aa12□□□□□ -0.49
SND1-215ENST00000492772 Q6ZS52 159 aa12□□□□□ -0.49
SND1-215ENST00000492772 USP37Q86T82 979 aa12□□□□□ -0.49
SND1-215ENST00000492772 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
SND1-215ENST00000492772 DAW1Q8N136 415 aa12□□□□□ -0.49
SND1-215ENST00000492772 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
SND1-215ENST00000492772 RSPRY1Q96DX4 576 aa12□□□□□ -0.49
SND1-215ENST00000492772 TIPINQ9BVW5 301 aa12□□□□□ -0.49
SND1-215ENST00000492772 LRRC3Q9BY71 257 aa12□□□□□ -0.49
SND1-215ENST00000492772 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
SND1-215ENST00000492772 OBP2AQ9NY56 170 aa12□□□□□ -0.49
SND1-215ENST00000492772 TUBGCP4Q9UGJ1 667 aa12□□□□□ -0.49
SND1-215ENST00000492772 ANGPTL2Q9UKU9 493 aa12□□□□□ -0.49
SND1-215ENST00000492772 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
SND1-215ENST00000492772 DNM3Q9UQ16 869 aa12□□□□□ -0.49
SND1-215ENST00000492772 ASB3Q9Y575 518 aa12□□□□□ -0.49
SND1-215ENST00000492772 CHD6Q8TD26 2715 aa12□□□□□ -0.49
SND1-215ENST00000492772 MYH11P35749 1972 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 MEFVO15553 781 aaPredicted RBP11.99□□□□□ -0.49
SND1-215ENST00000492772 GDF9O60383 454 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 VNN2O95498 520 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 KCNA4P22459 653 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 AARSP49588 968 aaKnown RBP eCLIP11.99□□□□□ -0.49
SND1-215ENST00000492772 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 GPR17Q13304 367 aa11.99□□□□□ -0.49
SND1-215ENST00000492772 GNL2Q13823 731 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms