RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 RBM12Q9NTZ6 932 aaKnown RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 SUSD2Q9UGT4 822 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 PCDHB10Q9UN67 800 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 MRPS17Q9Y2R5 130 aaKnown RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 MAP3K2Q9Y2U5 619 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 MTCL1Q9Y4B5 1905 aaKnown RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 ZMYM6O95789 1325 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 FAM155BO75949 473 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 AKAP3O75969 853 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 COL4A2P08572 1712 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 HLA-EP13747 358 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 PFKPQ01813 784 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 HNRNPDQ14103 355 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 SMC1AQ14683 1233 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 SEPT2Q15019 361 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 PREPLQ4J6C6 727 aaPredicted RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 SPOUT1Q5T280 376 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 TATDN1Q6P1N9 297 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 PDXDC1Q6P996 788 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 IGF2-ASQ6U949 168 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 SHISA2Q6UWI4 295 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 C15orf39Q6ZRI6 1047 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 AGGF1Q8N302 714 aaeCLIP4.76□□□□□ -1.65
UBR4-215ENST00000492606 TMEM130Q8N3G9 435 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 SPATA20Q8TB22 786 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 GLG1Q92896 1179 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 GPATCH3Q96I76 525 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 TMEM87BQ96K49 555 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 RUSC1Q9BVN2 902 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 EPN3Q9H201 632 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 CWH43Q9H720 699 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 TYW1Q9NV66 732 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 KLHL3Q9UH77 587 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 ZMYM5Q9UJ78 669 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 PALD1Q9ULE6 856 aa4.76□□□□□ -1.65
UBR4-215ENST00000492606 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBR4-215ENST00000492606 APOBEC2Q9Y235 224 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 R3HCC1Q9Y3T6 440 aaKnown RBP4.76□□□□□ -1.65
UBR4-215ENST00000492606 ANK2Q01484 3957 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 MN1Q10571 1320 aaPredicted RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 ESYT3A0FGR9 886 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ASB14A6NK59 587 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 F8W735 103 aaPredicted RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 RGS13O14921 159 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 KCNAB3O43448 404 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 EXTL3O43909 919 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ALX3O95076 343 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 CXCL14O95715 111 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 PBX3P40426 434 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 TMPRSS3P57727 454 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ETF1P62495 437 aaKnown RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 LMAN2Q12907 356 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 GRIK4Q16099 956 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ABCB5Q2M3G0 1257 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 LINC00303Q3SY05 128 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 TRIM61Q5EBN2 209 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 SLC6A19Q695T7 634 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 Q6ZS46 218 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ACAD11Q709F0 780 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 GET4Q7L5D6 327 aaPredicted RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 SIAH1Q8IUQ4 282 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ARID3BQ8IVW6 561 aaPredicted RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 TEX11Q8IYF3 940 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 C7orf31Q8N865 590 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 VGLL2Q8N8G2 317 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 SNRNP27Q8WVK2 155 aaKnown RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 STAMQ92783 540 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 ISL2Q96A47 359 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 KAZALD1Q96I82 304 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 KIF2CQ99661 725 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 KXD1Q9BQD3 176 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 POLR3GLQ9BT43 218 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 TEX13BQ9BXU2 312 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 VTA1Q9NP79 307 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 FAM105AQ9NUU6 356 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 PUF60Q9UHX1 559 aaKnown RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 EVLQ9UI08 416 aaPredicted RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 ACTL7BQ9Y614 415 aa4.75□□□□□ -1.65
UBR4-215ENST00000492606 HELZP42694 1942 aaKnown RBP4.75□□□□□ -1.65
UBR4-215ENST00000492606 PCDH15Q96QU1 1955 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 TNRC6BQ9UPQ9 1833 aaKnown RBP4.74□□□□□ -1.65
UBR4-215ENST00000492606 MXRA5Q9NR99 2828 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 PCLOQ9Y6V0 5065 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 ANKRD62A6NC57 917 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 C9IYK1 514 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 E9PAM4 449 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
UBR4-215ENST00000492606 DDAH1O94760 285 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 RHOBTB1O94844 696 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 CLDN1O95832 211 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 ATXN1LP0C7T5 689 aaKnown RBP4.74□□□□□ -1.65
UBR4-215ENST00000492606 FGFR2P21802 821 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 CA8P35219 290 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 ELF2Q15723 593 aa4.74□□□□□ -1.65
UBR4-215ENST00000492606 BRDTQ58F21 947 aaPredicted RBP4.74□□□□□ -1.65
UBR4-215ENST00000492606 TAF7LQ5H9L4 462 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms