RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 H7C4K7 107 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 K7ESF4 209 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 PODXLO00592 558 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 ZNF263O14978 683 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 KCNE1P15382 129 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 RPA1P27694 616 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 LIMK1P53667 647 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 FCHO2Q0JRZ9 810 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 DSG2Q14126 1118 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 SIM2Q14190 667 aaPredicted RBP8.99□□□□□ -0.97
USP39-216ENST00000490193 LRRC32Q14392 662 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 LPAL2Q16609 132 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 CYP4A22Q5TCH4 519 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 IQCEQ6IPM2 695 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 PADI6Q6TGC4 694 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 PRR23BQ6ZRT6 265 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 LONP2Q86WA8 852 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 ELMOD1Q8N336 334 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 BEST2Q8NFU1 509 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 E2F7Q96AV8 911 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 ZSWIM3Q96MP5 696 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 CDT1Q9H211 546 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 TMEM60Q9H2L4 133 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 C8orf33Q9H7E9 229 aaPredicted RBP8.99□□□□□ -0.97
USP39-216ENST00000490193 CYP4F11Q9HBI6 524 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 PTPRHQ9HD43 1115 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 CEP72Q9P209 647 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 AFF4Q9UHB7 1163 aaKnown RBP8.99□□□□□ -0.97
USP39-216ENST00000490193 FBXL5Q9UKA1 691 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 LAMA1P25391 3075 aa8.99□□□□□ -0.97
USP39-216ENST00000490193 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 BTBD18B2RXH4 712 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CHURC1-FNTBB4DL54 471 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 TM4SF5O14894 197 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CHADO15335 359 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CCNE1P24864 410 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 PMLP29590 882 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 RPL9P32969 192 aaKnown RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 VIPR2P41587 438 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 FNTBP49356 437 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 YARSP54577 528 aaKnown RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 SHC2P98077 582 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 DMWDQ09019 674 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ORC2Q13416 577 aaPredicted RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 WDR44Q5JSH3 913 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 DGKKQ5KSL6 1271 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ZNF280DQ6N043 979 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 DIS3L2Q8IYB7 885 aaKnown RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 HS6ST3Q8IZP7 471 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CEP120Q8N960 986 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ZSCAN18Q8TBC5 510 aaPredicted RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 KIFAP3Q92845 792 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 IFT74Q96LB3 600 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ZNF512Q96ME7 567 aaPredicted RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 ZMAT2Q96NC0 199 aaKnown RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 KIFC3Q9BVG8 833 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CCDC94Q9BW85 323 aaPredicted RBP8.98□□□□□ -0.97
USP39-216ENST00000490193 LRRC3Q9BY71 257 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 ASAH2Q9NR71 780 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 CNTN3Q9P232 1028 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 EML5Q05BV3 1969 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 PHLPP2Q6ZVD8 1323 aa8.98□□□□□ -0.97
USP39-216ENST00000490193 MYBPHLA2RUH7 354 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 HEPACAM2A8MVW5 462 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 K7ERI5 159 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 ABLIM1O14639 778 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 GDF9O60383 454 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 LIG1P18858 919 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 PROZP22891 400 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 TWF1Q12792 350 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 CTXN3Q4LDR2 81 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 WDR5BQ86VZ2 330 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 RALGPS2Q86X27 583 aaPredicted RBP8.97□□□□□ -0.97
USP39-216ENST00000490193 TMC8Q8IU68 726 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 SYNPOQ8N3V7 929 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
USP39-216ENST00000490193 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 ERMNQ8TAM6 284 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 SHKBP1Q8TBC3 707 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 CSGALNACT1Q8TDX6 532 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 WNT2BQ93097 391 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 RSPRY1Q96DX4 576 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 LOXL4Q96JB6 756 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 ACO2Q99798 780 aaKnown RBP8.97□□□□□ -0.97
USP39-216ENST00000490193 OXCT2Q9BYC2 517 aaPredicted RBP8.97□□□□□ -0.97
USP39-216ENST00000490193 TMEM134Q9H6X4 195 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 OBP2AQ9NY56 170 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 ARHGAP28Q9P2N2 729 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 ANGPTL2Q9UKU9 493 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 NUB1Q9Y5A7 615 aa8.97□□□□□ -0.97
USP39-216ENST00000490193 TSC2P49815 1807 aa8.96□□□□□ -0.97
USP39-216ENST00000490193 DENND4CQ5VZ89 1909 aa8.96□□□□□ -0.97
USP39-216ENST00000490193 CCDC163A0A0D9SF12 145 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 SPECC1L-ADORA2AF8WAN1 911 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms