RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 NFKBIBQ15653 356 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 CALCRLQ16602 461 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 LEXMQ3ZCV2 418 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 FAM102BQ5T8I3 360 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 CES5AQ6NT32 575 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 CDPF1Q6NVV7 123 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 FBXL19Q6PCT2 694 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 RUFY3Q7L099 469 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 DYMQ7RTS9 669 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PLPPR4Q7Z2D5 763 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 NEK8Q86SG6 692 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 ZDHHC13Q8IUH4 622 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 HACE1Q8IYU2 909 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 NECAB1Q8N987 351 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 FLCNQ8NFG4 579 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 GRIN3AQ8TCU5 1115 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 NOC3LQ8WTT2 800 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 GATAD2BQ8WXI9 593 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 LINC01599Q8WXQ3 324 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 AUTS2Q8WXX7 1259 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 LPPQ93052 612 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 TMEM143Q96AN5 459 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PGBD4Q96DM1 585 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PABPC5Q96DU9 382 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 CTAGE1Q96RT6 745 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PCYT2Q99447 389 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 JPH2Q9BR39 696 aaPredicted RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 RNF26Q9BY78 433 aaPredicted RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 MRPL9Q9BYD2 267 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 INO80BQ9C086 356 aaPredicted RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 LMAN2LQ9H0V9 348 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 TYW1Q9NV66 732 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 DBR1Q9UK59 544 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 USP15Q9Y4E8 981 aaPredicted RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 PCDHB5Q9Y5E4 795 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 PCDHA2Q9Y5H9 948 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 IGSF9BQ9UPX0 1349 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 ZNFX1Q9P2E3 1918 aaKnown RBP4.38□□□□□ -1.71
RPN1-205ENST00000490166 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
RPN1-205ENST00000490166 A0A087WZ62 844 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ARHGEF35A5YM69 484 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 MEIS1O00470 390 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 PRPF3O43395 683 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 NCK2O43639 380 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ZNF862O60290 1169 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 MGEA5O60502 916 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 TBX10O75333 385 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 CILPO75339 1184 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 DGKIO75912 1065 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 POMCP01189 267 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 URODP06132 367 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 RB1P06400 928 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ITGA4P13612 1032 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 KLRC2P26717 231 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 PDIA3P30101 505 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 MCM7P33993 719 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 TXKP42681 527 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ASPAP45381 313 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 NEK4P51957 841 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 PSMC5P62195 406 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 RBM10P98175 930 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 GHRHRQ02643 423 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 SMAD4Q13485 552 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 COL9A2Q14055 689 aaPredicted RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 MPP2Q14168 576 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 TFDP1Q14186 410 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 SMC1AQ14683 1233 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 GPNMBQ14956 572 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 EMC2Q15006 297 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 CPSF6Q16630 551 aaKnown RBP eCLIP4.37□□□□□ -1.71
RPN1-205ENST00000490166 XKR3Q5GH77 459 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 SNAP47Q5SQN1 464 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 MARCH8Q5T0T0 291 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 XP32Q5T750 250 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ABHD15Q6UXT9 468 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 SLC24A5Q71RS6 500 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 OTUD6AQ7L8S5 288 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 NIPA1Q7RTP0 329 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 CABP7Q86V35 215 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 KSR1Q8IVT5 923 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 CCDC83Q8IWF9 413 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 ZBTB8OSQ8IWT0 167 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 NME8Q8N427 588 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 TDRD5Q8NAT2 981 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 GOLM1Q8NBJ4 401 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 RNF149Q8NC42 400 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 DEPTORQ8TB45 409 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 SHKBP1Q8TBC3 707 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 KCNG4Q8TDN1 519 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 HASPINQ8TF76 798 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 FBLIM1Q8WUP2 373 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 PSPC1Q8WXF1 523 aaKnown RBP4.37□□□□□ -1.71
RPN1-205ENST00000490166 DYDC2Q96IM9 177 aa4.37□□□□□ -1.71
RPN1-205ENST00000490166 CPB2Q96IY4 423 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms