RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-215	ENST00000490140	HAUS6	Q7Z4H7	955 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	CELF5	Q8N6W0	485 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	FAM3C	Q92520	227 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	DDX12P	Q92771	950 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	BICD1	Q96G01	975 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	ZMAT2	Q96NC0	199 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	NTPCR	Q9BSD7	190 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	RTKN	Q9BST9	563 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	UBQLN1	Q9UMX0	589 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	ACACB	O00763	2458 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140	SPTBN2	O15020	2390 aa		12.84	□□□□□ -0.35
FDPS-215	ENST00000490140		E9PMD0	336 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	DPYSL4	O14531	572 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	SLC16A4	O15374	487 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	CYP3A5	P20815	502 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	CNR2	P34972	360 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ALDH1A3	P47895	512 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	MCL1	Q07820	350 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ECM1	Q16610	540 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ARHGAP15	Q53QZ3	475 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	RILPL1	Q5EBL4	403 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	C1orf186	Q6ZWK4	172 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ITIH5	Q86UX2	942 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	MAP4K3	Q8IVH8	894 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	MFSD6L	Q8IWD5	586 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	DAW1	Q8N136	415 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	C18orf25	Q96B23	403 aa	Predicted RBP	12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	TCEAL4	Q96EI5	215 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	GCNA	Q96QF7	691 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	RUSC1	Q9BVN2	902 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	PLA2G2F	Q9BZM2	168 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ZMYM5	Q9UJ78	669 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	YIPF1	Q9Y548	306 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	ASB3	Q9Y575	518 aa		12.83	□□□□□ -0.36
FDPS-215	ENST00000490140	TICRR	Q7Z2Z1	1910 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140		M0QZQ0	153 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	HNRNPDL	O14979	420 aa	Known RBP	12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	CHAD	O15335	359 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	SLC26A4	O43511	780 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	OAZ2	O95190	189 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	SEC24A	O95486	1093 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	ODC1	P11926	461 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	CXCL12	P48061	93 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	KPNA1	P52294	538 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	ST3GAL1	Q11201	340 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	VEPH1	Q14D04	833 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	ARMCX5	Q6P1M9	558 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	VIT	Q6UXI7	678 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	TAS1R3	Q7RTX0	852 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	CD302	Q8IX05	232 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	C4orf32	Q8N8J7	132 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	TMEM161B	Q8NDZ6	487 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	BEST2	Q8NFU1	509 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	KIF12	Q96FN5	646 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	POLD4	Q9HCU8	107 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	HSFX1	Q9UBD0	423 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	ODF2L	Q9ULJ1	636 aa		12.82	□□□□□ -0.36
FDPS-215	ENST00000490140	COL4A3	Q01955	1670 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	ABLIM1	O14639	778 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	CXCL8	P10145	99 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	MAPT	P10636	758 aa	Known RBP	12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	TYMP	P19971	482 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	IGFBP6	P24592	240 aa	Predicted RBP	12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	LRPAP1	P30533	357 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	CCR2	P41597	374 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	LIG4	P49917	911 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	PLCB2	Q00722	1185 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	FCHO2	Q0JRZ9	810 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	MAPK7	Q13164	816 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	MYBPC2	Q14324	1141 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	NBR1	Q14596	966 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	PTPA	Q15257	358 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	ZRSR1	Q15695	479 aa	Known RBP	12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	SLC10A6	Q3KNW5	377 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	ARHGAP29	Q52LW3	1261 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	DGKK	Q5KSL6	1271 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	OVOS1	Q6IE37	1185 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	TSSK4	Q6SA08	328 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	DSTYK	Q6XUX3	929 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	RNF19B	Q6ZMZ0	732 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	PRR23B	Q6ZRT6	265 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	RALGPS2	Q86X27	583 aa	Predicted RBP	12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	SPEM1	Q8N4L4	309 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	NETO1	Q8TDF5	533 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	LMAN1L	Q9HAT1	526 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	PPP4R2	Q9NY27	417 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	CEP72	Q9P209	647 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	TUBGCP4	Q9UGJ1	667 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	PCDHB6	Q9Y5E3	794 aa		12.81	□□□□□ -0.36
FDPS-215	ENST00000490140	COL4A2	P08572	1712 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	HEPACAM2	A8MVW5	462 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	PAPSS2	O95340	614 aa	Predicted RBP	12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	RET	P07949	1114 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	CCNE1	P24864	410 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	RAD51AP2	Q09MP3	1159 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	GPR17	Q13304	367 aa		12.8	□□□□□ -0.36
FDPS-215	ENST00000490140	TEAD2	Q15562	447 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms