RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TEAD2Q15562 447 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 HYIQ5T013 277 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 SYT2Q8N9I0 419 aaPredicted RBP17.3■□□□□ 0.36
PLOD3-216ENST00000489927 LEMD2Q8NC56 503 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 ZSCAN18Q8TBC5 510 aaPredicted RBP17.3■□□□□ 0.36
PLOD3-216ENST00000489927 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 CHRDQ9H2X0 955 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 TRPV5Q9NQA5 729 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 KCNG1Q9UIX4 513 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 YIPF1Q9Y548 306 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 PIAS3Q9Y6X2 628 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 CITO14578 2027 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 CEP250Q9BV73 2442 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 OAZ2O95190 189 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 VNN2O95498 520 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 OR4Q2P0C623 313 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 TDGF1P13385 188 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 LRPAP1P30533 357 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 MATR3P43243 847 aaKnown RBP eCLIP17.29■□□□□ 0.36
PLOD3-216ENST00000489927 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 BEST2Q8NFU1 509 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 SHKBP1Q8TBC3 707 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 DEPDC1BQ8WUY9 529 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 FAM3CQ92520 227 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 PGLYRP2Q96PD5 576 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 PLIN2Q99541 437 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
PLOD3-216ENST00000489927 CRISPLD1Q9H336 500 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 TRPV4Q9HBA0 871 aa17.29■□□□□ 0.36
PLOD3-216ENST00000489927 PDCD11Q14690 1871 aaKnown RBP17.29■□□□□ 0.36
PLOD3-216ENST00000489927 NPHP3-ACAD11A0A0J9YXS1 232 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 ZNF263O14978 683 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 CLTAP09496 248 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 TNFSF9P41273 254 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
PLOD3-216ENST00000489927 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
PLOD3-216ENST00000489927 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 MAMSTRQ6ZN01 415 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 GPR161Q8N6U8 529 aaKnown RBP17.28■□□□□ 0.36
PLOD3-216ENST00000489927 SECISBP2LQ93073 1101 aaKnown RBP17.28■□□□□ 0.36
PLOD3-216ENST00000489927 RSPRY1Q96DX4 576 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 KIF12Q96FN5 646 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 LRRC3Q9BY71 257 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 LMAN1LQ9HAT1 526 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 KCND2Q9NZV8 630 aa17.28■□□□□ 0.36
PLOD3-216ENST00000489927 A0A1W2PRU2 124 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 VWA3AA6NCI4 1184 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 HEPACAM2A8MVW5 462 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 ARNTLO00327 626 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 CYP3A5P20815 502 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 AARSP49588 968 aaKnown RBP eCLIP17.27■□□□□ 0.36
PLOD3-216ENST00000489927 GUCY2FP51841 1108 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 DUSP4Q13115 394 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 ARSHQ5FYA8 562 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 MCTP1Q6DN14 999 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 USP37Q86T82 979 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 TMC8Q8IU68 726 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 KCTD17Q8N5Z5 321 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 BICD1Q96G01 975 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 IER2Q9BTL4 223 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 OXCT2Q9BYC2 517 aaPredicted RBP17.27■□□□□ 0.36
PLOD3-216ENST00000489927 GPR88Q9GZN0 384 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 DNAJC25Q9H1X3 360 aa17.27■□□□□ 0.36
PLOD3-216ENST00000489927 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.36
PLOD3-216ENST00000489927 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.35
PLOD3-216ENST00000489927 LACTBL1A8MY62 500 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 CHRNB1P11230 501 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 TGM1P22735 817 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 CCNE1P24864 410 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 NCKAP1LP55160 1127 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 PPP2R3AQ06190 1150 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 GPR17Q13304 367 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 PLD1Q13393 1074 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 ENOX2Q16206 610 aaKnown RBP17.26■□□□□ 0.35
PLOD3-216ENST00000489927 HAUS6Q7Z4H7 955 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 CDK5RAP3Q96JB5 506 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
PLOD3-216ENST00000489927 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
PLOD3-216ENST00000489927 NCOR2Q9Y618 2525 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 H0YCG3 227 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 PPEF2O14830 753 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 HNRNPDLO14979 420 aaKnown RBP17.25■□□□□ 0.35
PLOD3-216ENST00000489927 FAM189A1O60320 539 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 LIG4P49917 911 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 CCR3P51677 355 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 EPHB3P54753 998 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 NRLP54845 237 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 GAS6Q14393 721 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 PPP2R5DQ14738 602 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 STXBP5Q5T5C0 1151 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 OVOS1Q6IE37 1185 aa17.25■□□□□ 0.35
PLOD3-216ENST00000489927 CENPPQ6IPU0 288 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms