RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 YIPF1Q9Y548 306 aa11.33□□□□□ -0.6
CHKB-211ENST00000489453 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
CHKB-211ENST00000489453 SFI1A8K8P3 1242 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 H0YCG3 227 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 DPYSL4O14531 572 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 CLDN3O15551 220 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 PLS3P13797 630 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 GJA1P17302 382 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 ALDH1A3P47895 512 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 LPAL2Q16609 132 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 C1orf228Q6PIY5 440 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 DSTYKQ6XUX3 929 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 TAS1R3Q7RTX0 852 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 MFSD6LQ8IWD5 586 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 DAW1Q8N136 415 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 C4orf32Q8N8J7 132 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 NELL1Q92832 810 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 MSANTD3Q96H12 275 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
CHKB-211ENST00000489453 PGLYRP2Q96PD5 576 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 TRPV5Q9NQA5 729 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
CHKB-211ENST00000489453 CEP72Q9P209 647 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 DENND4CQ5VZ89 1909 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 TSC2P49815 1807 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 SPTBN2O15020 2390 aa11.32□□□□□ -0.6
CHKB-211ENST00000489453 CACNA1BQ00975 2339 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 HEPACAM2A8MVW5 462 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 CLTAP09496 248 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 CXCL8P10145 99 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 CDC25AP30304 524 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 PRPHP41219 470 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 CXCL12P48061 93 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 SPAG1Q07617 926 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 MAPK7Q13164 816 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 FZD5Q13467 585 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 KYAT1Q16773 422 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 ARHGAP15Q53QZ3 475 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 LAIR1Q6GTX8 287 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 POTEHQ6S545 545 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 HAUS6Q7Z4H7 955 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
CHKB-211ENST00000489453 MAP4K3Q8IVH8 894 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
CHKB-211ENST00000489453 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 ZSWIM3Q96MP5 696 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 UBQLN1Q9UMX0 589 aaKnown RBP11.31□□□□□ -0.6
CHKB-211ENST00000489453 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 TIMM13Q9Y5L4 95 aaPredicted RBP11.31□□□□□ -0.6
CHKB-211ENST00000489453 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
CHKB-211ENST00000489453 SCN1AP35498 2009 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 M0QZQ0 153 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 ABLIM1O14639 778 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 FGF19O95750 216 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 OR4Q2P0C623 313 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
CHKB-211ENST00000489453 CCNE1P24864 410 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHKB-211ENST00000489453 LIG4P49917 911 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 ATXN1P54253 815 aaKnown RBP11.3□□□□□ -0.6
CHKB-211ENST00000489453 EPHA5P54756 1037 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 MCL1Q07820 350 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 SPEM2Q0P670 501 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 DUSP4Q13115 394 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
CHKB-211ENST00000489453 C8orf33Q9H7E9 229 aaPredicted RBP11.3□□□□□ -0.6
CHKB-211ENST00000489453 LARSQ9P2J5 1176 aaKnown RBP11.3□□□□□ -0.6
CHKB-211ENST00000489453 DCDC2BA2VCK2 349 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 SHISA7A6NL88 538 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 CHADO15335 359 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 MOSPD3O75425 235 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 OAZ2O95190 189 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 RETP07949 1114 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 PLA2G4BP0C869 781 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms