RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 FMO2Q99518 471 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 DHX33Q9H6R0 707 aaKnown RBP19.56■□□□□ 0.72
COL16A1-215ENST00000488897 ANKEF1Q9NU02 776 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 DBR1Q9UK59 544 aaKnown RBP19.56■□□□□ 0.72
COL16A1-215ENST00000488897 AKT3Q9Y243 479 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 TRIM49P0CI25 452 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 TRIM49CP0CI26 452 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 USP8P40818 1118 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 TLE2Q04725 743 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 BFSP1Q12934 665 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 KIAA0319LQ8IZA0 1049 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 NLRP4Q96MN2 994 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 POLR3FQ9H1D9 316 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-215ENST00000488897 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 NOVA2Q9UNW9 492 aaKnown RBP19.56■□□□□ 0.72
COL16A1-215ENST00000488897 NOD1Q9Y239 953 aa19.56■□□□□ 0.72
COL16A1-215ENST00000488897 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 ARVCFO00192 962 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 EXOC3O60645 756 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 COL6A1P12109 1028 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 HADHBP55084 474 aaKnown RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 DR1Q01658 176 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 DHX34Q14147 1143 aaKnown RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 DCAF12L1Q5VU92 463 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 SYCP3Q8IZU3 236 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 CNPY4Q8N129 248 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 DHX38Q92620 1227 aaKnown RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 ERP44Q9BS26 406 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 TSEN34Q9BSV6 310 aaKnown RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 C11orf49Q9H6J7 331 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 SEPT11Q9NVA2 429 aaKnown RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 ARID2Q68CP9 1835 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 TRAPPC3O43617 180 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 MAFO75444 373 aaPredicted RBP19.55■□□□□ 0.72
COL16A1-215ENST00000488897 GUCY2CP25092 1073 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 SLC26A2P50443 739 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 CDR1P51861 262 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 PEX3P56589 373 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 ARHGAP44Q17R89 818 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 KRT71Q3SY84 523 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 DUPD1Q68J44 220 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 ARHGEF26Q96DR7 871 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 CYFIP2Q96F07 1278 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 AGPAT1Q99943 283 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 THAP2Q9H0W7 228 aa19.55■□□□□ 0.72
COL16A1-215ENST00000488897 PAEPP09466 180 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 KRT13P13646 458 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 FNTAP49354 379 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 IFFO1Q0D2I5 559 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 CETN1Q12798 172 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 FAM167AQ96KS9 214 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 TRIM51Q9BSJ1 452 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 TXLNGYQ9BZA5 131 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 ATP6V0A4Q9HBG4 840 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 NR2E1Q9Y466 385 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 MIF4GDA9UHW6 222 aaKnown RBP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 H0YHG0 523 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 FOXN3O00409 490 aaPredicted RBP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 KPNA6O60684 536 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 DRG2P55039 364 aaKnown RBP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 TCEAL1Q15170 157 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 PHLDB3Q6NSJ2 640 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 C6orf89Q6UWU4 347 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 CDR2LQ86X02 465 aaPredicted RBP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 STRA6Q9BX79 667 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 CNOT10Q9H9A5 744 aaKnown RBP19.54■□□□□ 0.72
COL16A1-215ENST00000488897 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
COL16A1-215ENST00000488897 TTLL13PA6NNM8 815 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 GLRA2P23416 452 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 ITGB8P26012 769 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 THPOP40225 353 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 CDK7P50613 346 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 ZNF484Q5JVG2 852 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 RNF187Q5TA31 235 aaPredicted RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 LMO3Q8TAP4 145 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 TRIM31Q9BZY9 425 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 MINDY3Q9H8M7 445 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 TAS2R14Q9NYV8 317 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 ATP8A1Q9Y2Q0 1164 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 SZT2Q5T011 3432 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 CCDC169A6NNP5 214 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 SLC16A4O15374 487 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 P4HA2O15460 535 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 DKC1O60832 514 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 DGAT1O75907 488 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 HNRNPH1P31943 449 aaKnown RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 GTF2A1P52655 376 aaPredicted RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 NLRP11P59045 1033 aaKnown RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 MAGOHP61326 146 aaKnown RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 IFT88Q13099 833 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 FBXW10Q5XX13 1052 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 C11orf63Q6NUN7 778 aa19.53■□□□□ 0.72
COL16A1-215ENST00000488897 INTS8Q75QN2 995 aaKnown RBP19.53■□□□□ 0.72
COL16A1-215ENST00000488897 NECAB2Q7Z6G3 386 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms