RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	MAP2K6	P52564	334 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	ZNF280A	P59817	542 aa	Predicted RBP	4.16	□□□□□ -1.74
CD46-215	ENST00000488596	REST	Q13127	1097 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	CCDC181	Q5TID7	509 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	ABHD17B	Q5VST6	288 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	EFCAB12	Q6NXP0	572 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	RNF169	Q8NCN4	708 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	TMX3	Q96JJ7	454 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	CGRRF1	Q99675	332 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	MYOC	Q99972	504 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	MANSC1	Q9H8J5	431 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	POGK	Q9P215	609 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	RUVBL1	Q9Y265	456 aa	Known RBP	4.16	□□□□□ -1.74
CD46-215	ENST00000488596	USP15	Q9Y4E8	981 aa	Predicted RBP	4.16	□□□□□ -1.74
CD46-215	ENST00000488596	PCDHA3	Q9Y5H8	950 aa		4.16	□□□□□ -1.74
CD46-215	ENST00000488596	CFAP20	Q9Y6A4	193 aa	Known RBP	4.16	□□□□□ -1.74
CD46-215	ENST00000488596	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.16	□□□□□ -1.74
CD46-215	ENST00000488596		A6NNZ2	444 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	PRC1	O43663	620 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	DTNB	O60941	627 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	ESRRB	O95718	433 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	FTL	P02792	175 aa	Predicted RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	GNAL	P38405	381 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	CDC42EP1	Q00587	391 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	BMT2	Q1RMZ1	405 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	CCDC157	Q569K6	752 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	PPP4R3A	Q6IN85	833 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	OVCH2	Q7RTZ1	564 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	TTC7B	Q86TV6	843 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	COL23A1	Q86Y22	540 aa	Predicted RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	SH2D3C	Q8N5H7	860 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	BOLL	Q8N9W6	283 aa	Known RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	SLC35B2	Q8TB61	432 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	NSUN6	Q8TEA1	469 aa	Known RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	CCDC136	Q96JN2	1154 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	MRGPRX4	Q96LA9	322 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	LRFN3	Q9BTN0	628 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	ARMT1	Q9H993	441 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	LANCL2	Q9NS86	450 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	TES	Q9UGI8	421 aa	Known RBP	4.15	□□□□□ -1.75
CD46-215	ENST00000488596	NR2E3	Q9Y5X4	410 aa		4.15	□□□□□ -1.75
CD46-215	ENST00000488596	ATRNL1	Q5VV63	1379 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	POLR2A	P24928	1970 aa	Known RBP	4.14	□□□□□ -1.75
CD46-215	ENST00000488596		B5MCH6	92 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	ERC2	O15083	957 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	UBXN7	O94888	489 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	RPLP2	P05387	115 aa	Known RBP	4.14	□□□□□ -1.75
CD46-215	ENST00000488596	RAP2A	P10114	183 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	MGAT1	P26572	445 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	GUCY1A2	P33402	732 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	ALDH1A3	P47895	512 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	TBX4	P57082	545 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	ATP8B2	P98198	1209 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	SCAP	Q12770	1279 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	SNAPC2	Q13487	334 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	MTM1	Q13496	603 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	GALE	Q14376	348 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	ERCC6L	Q2NKX8	1250 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	FAM47A	Q5JRC9	791 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	PAPD7	Q5XG87	772 aa	Known RBP	4.14	□□□□□ -1.75
CD46-215	ENST00000488596	AFMID	Q63HM1	303 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	KSR2	Q6VAB6	950 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	PDZD4	Q76G19	769 aa	Predicted RBP	4.14	□□□□□ -1.75
CD46-215	ENST00000488596	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.14	□□□□□ -1.75
CD46-215	ENST00000488596	DGKH	Q86XP1	1220 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	DENND1C	Q8IV53	801 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	PLBD2	Q8NHP8	589 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	IFI44	Q8TCB0	444 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	TFAP2C	Q92754	450 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	RGMA	Q96B86	450 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	CYFIP2	Q96F07	1278 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	C1orf112	Q9NSG2	853 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	TMEM140	Q9NV12	185 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	FPGT-TNNI3K	V9GXZ4	949 aa		4.14	□□□□□ -1.75
CD46-215	ENST00000488596	DRGX	A6NNA5	263 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596		H3BML4	177 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596		H3BUI4	141 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	SGTA	O43765	313 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	GPR32	O75388	356 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	TUSC2	O75896	110 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	HLA-DOA	P06340	250 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	ELANE	P08246	267 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	SBK3	P0C264	359 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	SPATA31D3	P0C874	917 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	ITGAM	P11215	1152 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	CDK4	P11802	303 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	IL2RB	P14784	551 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	ALOX15	P16050	662 aa	Predicted RBP	4.13	□□□□□ -1.75
CD46-215	ENST00000488596	MAL	P21145	153 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	HTR1B	P28222	390 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	TLE1	Q04724	770 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	NOG	Q13253	232 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	MPP3	Q13368	585 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	GBX1	Q14549	363 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	MAP9	Q49MG5	647 aa		4.13	□□□□□ -1.75
CD46-215	ENST00000488596	GJC2	Q5T442	439 aa	Predicted RBP	4.13	□□□□□ -1.75
CD46-215	ENST00000488596	SP5	Q6BEB4	398 aa	Predicted RBP	4.13	□□□□□ -1.75

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