RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SYNPO2Q9UMS6 1093 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 MYO5AQ9Y4I1 1855 aaKnown RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 NFKBIEO00221 500 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 PPP1R37O75864 691 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 ARL4AP40617 200 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 LGSNQ5TDP6 509 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 FEZF2Q8TBJ5 459 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 ACTRT1Q8TDG2 376 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 MORC4Q8TE76 937 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 KLRG1Q96E93 195 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 NACA2Q9H009 215 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 AHDC1Q5TGY3 1603 aaPredicted RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 SIPA1L3O60292 1781 aaPredicted RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 INSRRP14616 1297 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 SNRPFP62306 86 aaKnown RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 NLRP14Q86W24 1093 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 GPC2Q8N158 579 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 SEMA4DQ92854 862 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 TACO1Q9BSH4 297 aaKnown RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 CISHQ9NSE2 258 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 GMNCA6NCL1 334 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 GOLGA8RI6L899 631 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 HUS1O60921 280 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 CSPG5O95196 566 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 C6orf222P0C671 652 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-216ENST00000486741 GLRA2P23416 452 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 PRKCIP41743 596 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 ITGA8P53708 1063 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 RILPQ96NA2 401 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-216ENST00000486741 ASNSD1Q9NWL6 643 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 KIAA0391O15091 583 aaKnown RBP13.99□□□□□ -0.17
HMGN1-216ENST00000486741 CREB3O43889 395 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 ZNF862O60290 1169 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 GZMAP12544 262 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 IL9RQ01113 521 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-216ENST00000486741 CFAP157Q5JU67 520 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 BEST2Q8NFU1 509 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 HPDLQ96IR7 371 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 RBM15Q96T37 977 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMGN1-216ENST00000486741 IRS2Q9Y4H2 1338 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 CST8O60676 142 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 MAP2K2P36507 400 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 MYBPC2Q14324 1141 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 TJP1Q07157 1748 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 MYH6P13533 1939 aa13.99□□□□□ -0.17
HMGN1-216ENST00000486741 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 IQCA1LA6NCM1 817 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CPP00450 1065 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 MDH1P40925 334 aaKnown RBP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 SLC1A1P43005 524 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 BCAR1P56945 870 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 NME3Q13232 169 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CCDC14Q49A88 953 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CDCA5Q96FF9 252 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CNOT10Q9H9A5 744 aaKnown RBP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 TNFSF9P41273 254 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 DAW1Q8N136 415 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 OR5B17Q8NGF7 314 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 ZNF606Q8WXB4 792 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 VPS33BQ9H267 617 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 METTL5Q9NRN9 209 aaKnown RBP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGN1-216ENST00000486741 MAP2K7O14733 419 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 NPTXRO95502 500 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 MT-ND3P03897 115 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 KRT7P08729 469 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CYP2C9P11712 490 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 LSP1P33241 339 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 AP3M2P53677 418 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 ITKQ08881 620 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CEP120Q8N960 986 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 DNERQ8NFT8 737 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 SUN1O94901 812 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 PDE1BQ01064 536 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 CCT8L2Q96SF2 557 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 POLIQ9UNA4 740 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 PCDHA2Q9Y5H9 948 aa13.98□□□□□ -0.17
HMGN1-216ENST00000486741 HUNKP57058 714 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 RBP5P82980 135 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 BYSLQ13895 437 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 RSPH3Q86UC2 560 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 CGRRF1Q99675 332 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 PRMT7Q9NVM4 692 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 A0A0A6YYK5 440 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 I3L4J1 428 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 TNPO2O14787 897 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 ADCY3O60266 1144 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 STAG3L1P0CL83 205 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms